| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q13243 | 272 | SRSF5_HUMAN Serine/arginine-rich splicing fac... | 60 | 0.0009 | 45.4 | 37 | 62 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006376; P:mRNA splice site selection; TAS:ProtInc.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 32 | Q18DN4 | 9159 | HMU_HALWD Halomucin OS=Haloquadratum walsbyi ... | 152 | 0.001 | 46.2 | 20 | 41 | GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro. | | | | | | | | | | GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0007156; P:homophilic cell adhesion; IEA:InterPro. | 33 | Q28HE9 | 490 | CELF1_XENTR CUGBP Elav-like family member 1 O... | 64 | 0.001 | 46.2 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 34 | Q8TBF4 | 217 | ZCRB1_HUMAN Zinc finger CCHC-type and RNA-bin... | 86 | 0.001 | 45.1 | 27 | 50 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005689; C:U12-type spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IC:HGNC. | 35 | O57406 | 489 | CEL1A_XENLA CUGBP Elav-like family member 1-A... | 64 | 0.001 | 46.2 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 36 | Q92879 | 486 | CELF1_HUMAN CUGBP Elav-like family member 1 O... | 64 | 0.001 | 45.8 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; NAS:UniProtKB. | | | | | | | | | | GO:0042835; F:BRE binding; IDA:UniProtKB.::GO:0003729; F:mRNA binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000900; F:translation repressor activity, nucleic acid binding; NAS:UniProtKB. | | | | | | | | | | GO:0009790; P:embryo development; NAS:UniProtKB.::GO:0007281; P:germ cell development; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB.::GO:0016246; P:RNA interference; NAS:UniProtKB. | 37 | Q4QQT3 | 487 | CELF1_RAT CUGBP Elav-like family member 1 OS=... | 64 | 0.001 | 45.8 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 38 | Q5R995 | 513 | CELF1_PONAB CUGBP Elav-like family member 1 O... | 64 | 0.001 | 45.8 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 39 | P28659 | 486 | CELF1_MOUSE CUGBP Elav-like family member 1 O... | 64 | 0.001 | 45.8 | 34 | 58 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI. | | | | | | | | | | GO:0042835; F:BRE binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0031369; F:translation initiation factor binding; IDA:MGI. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; IDA:MGI.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:MGI.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0007286; P:spermatid development; IMP:MGI. | 40 | Q5F3T7 | 489 | CELF1_CHICK CUGBP Elav-like family member 1 O... | 64 | 0.001 | 45.8 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 41 | Q9IBD0 | 501 | CELF1_DANRE CUGBP Elav-like family member 1 O... | 64 | 0.002 | 45.4 | 34 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 42 | Q792H5 | 508 | CELF2_RAT CUGBP Elav-like family member 2 OS=... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:RGD. | | | | | | | | | | | 43 | Q5R8Y8 | 508 | CELF2_PONAB CUGBP Elav-like family member 2 O... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 44 | Q9Z0H4 | 508 | CELF2_MOUSE CUGBP Elav-like family member 2 O... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; IDA:MGI. | 45 | O95319 | 508 | CELF2_HUMAN CUGBP Elav-like family member 2 O... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008016; P:regulation of heart contraction; TAS:ProtInc. | 46 | Q7T2T1 | 484 | CELF2_CHICK CUGBP Elav-like family member 2 O... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 47 | A4IIM2 | 513 | CELF2_XENTR CUGBP Elav-like family member 2 O... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 48 | Q23120 | 281 | RSP2_CAEEL Probable splicing factor, arginine... | 68 | 0.002 | 44.3 | 32 | 56 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0007506; P:gonadal mesoderm development; IEA:UniProtKB-KW.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IGI:UniProtKB.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; IGI:UniProtKB. | 49 | Q7ZXE2 | 536 | CELF2_XENLA CUGBP Elav-like family member 2 O... | 64 | 0.002 | 45.1 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 50 | Q54PB2 | 895 | MRD1_DICDI Multiple RNA-binding domain-contai... | 79 | 0.003 | 45.1 | 28 | 53 | GO:0005730; C:nucleolus; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030515; F:snoRNA binding; ISS:dictyBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:dictyBase. | 51 | Q28IQ9 | 166 | CIRBP_XENTR Cold-inducible RNA-binding protei... | 59 | 0.003 | 42.7 | 31 | 58 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; ISS:UniProtKB.::GO:0007369; P:gastrulation; ISS:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; ISS:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB. | 52 | Q5PPI1 | 221 | SRSF9_RAT Serine/arginine-rich splicing facto... | 56 | 0.008 | 42.4 | 39 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 53 | Q9DED4 | 166 | CIRBB_XENLA Cold-inducible RNA-binding protei... | 64 | 0.008 | 41.6 | 31 | 55 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; IMP:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB. | 54 | Q9D0B0 | 222 | SRSF9_MOUSE Serine/arginine-rich splicing fac... | 56 | 0.01 | 42 | 39 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 55 | Q08E07 | 461 | CELF3_BOVIN CUGBP Elav-like family member 3 O... | 64 | 0.012 | 42.7 | 30 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 56 | Q5SZQ8 | 465 | CELF3_HUMAN CUGBP Elav-like family member 3 O... | 64 | 0.012 | 42.7 | 30 | 53 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; NAS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; NAS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 57 | Q8CIN6 | 465 | CELF3_MOUSE CUGBP Elav-like family member 3 O... | 64 | 0.012 | 42.7 | 30 | 53 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0030317; P:sperm motility; IMP:MGI.::GO:0007283; P:spermatogenesis; IMP:MGI. | 58 | Q13242 | 221 | SRSF9_HUMAN Serine/arginine-rich splicing fac... | 56 | 0.013 | 41.6 | 39 | 64 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006376; P:mRNA splice site selection; TAS:ProtInc.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 59 | Q8IID4 | 5251 | DYHC2_PLAF7 Dynein heavy chain-like protein P... | 154 | 0.016 | 42.7 | 25 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; ISS:UniProtKB. | | | | | | | | | | GO:0007018; P:microtubule-based movement; ISS:UniProtKB. | 60 | Q6IQ97 | 419 | RBM41_DANRE RNA-binding protein 4.1 OS=Danio ... | 89 | 0.022 | 41.6 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 61 | Q9NW13 | 759 | RBM28_HUMAN RNA-binding protein 28 OS=Homo sa... | 50 | 0.035 | 41.2 | 38 | 58 | GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |
