Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL184C
Length:
612
Number of sequences:
5887
Description:
YPL184C MRN1 SGDID:S000006105, Chr XVI from 197788-195950, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA-binding protein proposed to be involved in translational regulation; binds specific categories of mRNAs, including those that contain upstream open reading frames (uORFs) and internal ribosome entry sites (IRES)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P13469    542   MODU_DROME DNA-binding protein modulo OS=Dros...2001.7     35.4     22     39GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005730; C:nucleolus; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.
GO:0008283; P:cell proliferation; IMP:FlyBase.::GO:0007286; P:spermatid development; IMP:FlyBase.
92Q54BM2    565   PAP1A_DICDI Polyadenylate-binding protein 1-A...631.8     35.4     38     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:dictyBase.
GO:0006378; P:mRNA polyadenylation; ISS:dictyBase.
93Q91903    389   ELAV2_XENLA ELAV-like protein 2 OS=Xenopus la...1952.1     34.7     22     42GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017131; F:uridine-rich cytoplasmic polyadenylylation element binding; IDA:UniProtKB.
GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.
94Q2HJ60    341   ROA2_BOVIN Heterogeneous nuclear ribonucleopr...792.1     34.7     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
95Q5BB35    417   CWC2_EMENI Pre-mRNA-splicing factor cwc2 OS=1...542.2     34.7     28     57GO:0000974; C:Prp19 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0045787; P:positive regulation of cell cycle; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; ISS:UniProtKB.
96Q8R0F5    326   RBMX2_MOUSE RNA-binding motif protein, X-link...492.2     34.7     33     55
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
97A7VJC2    353   ROA2_RAT Heterogeneous nuclear ribonucleoprot...702.2     34.7     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
98O88569    353   ROA2_MOUSE Heterogeneous nuclear ribonucleopr...702.3     34.7     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; ISS:HGNC.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:HGNC.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0097157; F:pre-mRNA intronic binding; IDA:MGI.::GO:0043047; F:single-stranded telomeric DNA binding; ISS:HGNC.
GO:0006397; P:mRNA processing; ISS:HGNC.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0050658; P:RNA transport; ISS:HGNC.
99P22626    353   ROA2_HUMAN Heterogeneous nuclear ribonucleopr...702.3     34.7     31     51GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; IDA:HGNC.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:HGNC.::GO:0043047; F:single-stranded telomeric DNA binding; IDA:HGNC.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0050658; P:RNA transport; IDA:HGNC.
100B0BN49    328   RBMX2_RAT RNA-binding motif protein, X-linked...492.3     34.7     33     55
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
101A4VT84    479   GATB_STRSY Aspartyl/glutamyl-tRNA(Asn/Gln) am...1482.4     34.7     26     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
102A4VZG6    479   GATB_STRS2 Aspartyl/glutamyl-tRNA(Asn/Gln) am...1482.4     34.7     26     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
103Q5RBU8    353   ROA2_PONAB Heterogeneous nuclear ribonucleopr...702.4     34.7     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
104Q7XTT4    707   NUCL2_ORYSJ Nucleolin 2 OS=Oryza sativa subsp...1682.8     34.7     27     45
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
105P25299    296   RNA15_YEAST mRNA 3'-end-processing protein RN...943.1     34.3     29     51GO:0005849; C:mRNA cleavage factor complex; IPI:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0046982; F:protein heterodimerization activity; IPI:SGD.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
106B7IUY0    475   GATB_BACC2 Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.4     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
107B7H4W3    475   GATB_BACC4 Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.5     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
108C1EV89    475   GATB_BACC3 Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.6     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
109B7JMB3    475   GATB_BACC0 Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.6     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
110Q81ZE7    475   GATB_BACAN Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.6     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
111A0R922    475   GATB_BACAH Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.6     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
112C3L560    475   GATB_BACAC Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.6     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
113C3PBQ5    475   GATB_BACAA Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.6     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
114Q6HP80    475   GATB_BACHK Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.8     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
115Q63GQ9    475   GATB_BACCZ Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.8     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
116Q81IN2    475   GATB_BACCR Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.8     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
117B9J1N1    475   GATB_BACCQ Aspartyl/glutamyl-tRNA(Asn/Gln) am...1503.8     34.3     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
118A5A3E0    1075   POTEF_HUMAN POTE ankyrin domain family member...1153.9     34.3     22     47GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.
119O13759    632   CSX1_SCHPO RNA-binding post-transcriptional r...904     34.3     31     50GO:0000932; C:cytoplasmic mRNA processing body; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:PomBase.::GO:2000815; P:regulation of mRNA stability involved in response to oxidative stress; IMP:PomBase.
120Q4PGU6    324   SLT11_USTMA Pre-mRNA-splicing factor SLT11 OS...814.2     33.9     26     53GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
121A9VRH8    475   GATB_BACWK Aspartyl/glutamyl-tRNA(Asn/Gln) am...1504.2     33.9     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
records
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