Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL183W-A
Length:
93
Number of sequences:
5887
Description:
YPL183W-A RTC6 SGDID:S000007224, Chr XVI from 199095-199376, Genome Release 64-1-1, Verified ORF, "Protein involved translation; mutants have defects in biogenesis of nuclear ribosomes; sequence similar to prokaryotic ribosomal protein L36, may be a mitochondrial ribosomal protein encoded in the nucleus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1O14464    93   RTC6_YEAST 54S ribosomal protein RTC6, mitoch...931e-62     191     100     100GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IMP:SGD.::GO:0006412; P:translation; IEA:InterPro.
2O94690    59   RTC6_SCHPO 54S ribosomal protein c83.06c, mit...450.00000000000009     65.1     64     78GO:0005762; C:mitochondrial large ribosomal subunit; ISS:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0032543; P:mitochondrial translation; NAS:PomBase.
3Q9P0J6    103   RM36_HUMAN 39S ribosomal protein L36, mitocho...730.000000000001     62.8     45     63GO:0005762; C:mitochondrial large ribosomal subunit; NAS:UniProtKB.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; NAS:UniProtKB.
4C1BJQ3    120   RM36_OSMMO 39S ribosomal protein L36, mitocho...920.0000000001     58.2     34     58GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
5B2RZ39    97   RM36_RAT 39S ribosomal protein L36, mitochond...380.0000000004     56.2     58     79GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
6Q1LWG3    116   RM36_DANRE 39S ribosomal protein L36, mitocho...390.0000000007     55.8     49     87GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
7B3WAJ5    38   RL36_LACCB 50S ribosomal protein L36 OS=Lacto...380.0000000007     54.3     68     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
8Q035A6    38   RL36_LACC3 50S ribosomal protein L36 OS=Lacto...380.0000000007     54.3     68     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
9Q99N90    102   RM36_MOUSE 39S ribosomal protein L36, mitocho...920.0000000009     55.5     37     51GO:0005739; C:mitochondrion; IDA:MGI.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
10P73300    38   RL36_SYNY3 50S ribosomal protein L36 OS=Synec...380.000000002     53.1     61     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
11Q19VB5    37   RK36_CHLAT 50S ribosomal protein L36, chlorop...380.000000004     52.4     63     76GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
12Q88XW3    39   RL36_LACPL 50S ribosomal protein L36 OS=Lacto...380.000000007     51.6     63     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
13Q1D752    38   RL36_MYXXD 50S ribosomal protein L36 OS=Myxoc...380.000000008     51.6     66     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
14Q1QDG5    38   RL36_PSYCK 50S ribosomal protein L36 OS=Psych...380.000000008     51.6     61     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
15Q03ED9    39   RL36_PEDPA 50S ribosomal protein L36 OS=Pedio...380.000000008     51.6     61     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16Q839E1    38   RL36_ENTFA 50S ribosomal protein L36 OS=Enter...380.000000009     51.2     61     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
17Q7V9Y2    38   RL36_PROMA 50S ribosomal protein L36 OS=Proch...380.00000001     51.2     58     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
18A9BCM7    38   RL36_PROM4 50S ribosomal protein L36 OS=Proch...380.00000001     51.2     58     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
19Q9RSK0    37   RL36_DEIRA 50S ribosomal protein L36 OS=LMG 4...380.00000001     50.8     66     76GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
20B2G8V5    39   RL36_LACRJ 50S ribosomal protein L36 OS=Lacto...380.00000001     50.8     61     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
21A5VLI2    39   RL36_LACRD 50S ribosomal protein L36 OS=Lacto...380.00000001     50.8     61     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
22Q4FUD5    38   RL36_PSYA2 50S ribosomal protein L36 OS=Psych...380.00000001     50.8     58     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
23Q38UT4    38   RL36_LACSS 50S ribosomal protein L36 OS=Lacto...380.00000002     50.8     61     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
24C1CXD8    37   RL36_DEIDV 50S ribosomal protein L36 OS=Deino...380.00000002     50.4     63     76GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
25P59774    37   RK36_CHLRE 50S ribosomal protein L36, chlorop...380.00000002     50.4     61     76GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
26Q9MUU8    38   RK36_MESVI 50S ribosomal protein L36, chlorop...380.00000002     50.4     55     74GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
27P48131    37   RK36_CYAPA 50S ribosomal protein L36, cyanell...380.00000002     50.4     63     71GO:0009842; C:cyanelle; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
28A6LLN7    38   RL36_THEM4 50S ribosomal protein L36 OS=Therm...380.00000002     50.4     58     76GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
29Q20F04    37   RK36_OLTVI 50S ribosomal protein L36, chlorop...380.00000002     50.1     66     74GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
30Q2JL77    38   RL36_SYNJB 50S ribosomal protein L36 OS=Yello...380.00000003     50.1     58     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
31B3R014    38   RL36_PHYMT 50S ribosomal protein L36 OS=Phyto...380.00000003     50.1     63     74GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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