Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL183C
Length:
1013
Number of sequences:
5887
Description:
YPL183C RTT10 SGDID:S000006104, Chr XVI from 202536-199495, Genome Release 64-1-1, reverse complement, Verified ORF, "Cytoplasmic protein with a role in regulation of Ty1 transposition"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451P58405    794   STRN3_RAT Striatin-3 OS=Rattus norvegicus (Ra...920.28     38.9     26     46GO:0030425; C:dendrite; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IDA:RGD.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IMP:RGD.::GO:0032355; P:response to estradiol stimulus; IDA:RGD.
452A8XSW2    691   WDR48_CAEBR WD repeat-containing protein 48 h...790.28     38.9     27     52
453P43601    500   ATG18_YEAST Autophagy-related protein 18 OS=S...1270.28     38.5     26     46GO:0005829; C:cytosol; IDA:SGD.::GO:0005768; C:endosome; IDA:SGD.::GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0070772; C:PAS complex; IDA:SGD.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IBA:RefGenome.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0032258; P:CVT pathway; IMP:SGD.::GO:0045324; P:late endosome to vacuole transport; IMP:SGD.::GO:0016236; P:macroautophagy; IDA:SGD.::GO:0030242; P:peroxisome degradation; IMP:SGD.::GO:0034727; P:piecemeal microautophagy of nucleus; IMP:SGD.::GO:0006624; P:vacuolar protein processing; IDA:SGD.
454A7A258    500   ATG18_YEAS7 Autophagy-related protein 18 OS=S...1270.28     38.5     26     46GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
455Q2KJJ5    800   TBL3_BOVIN Transducin beta-like protein 3 OS=...1150.29     38.9     19     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
456Q13033    797   STRN3_HUMAN Striatin-3 OS=Homo sapiens (Human...1730.29     38.9     26     40GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.::GO:0043234; C:protein complex; ISS:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0032355; P:response to estradiol stimulus; ISS:UniProtKB.
457A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...1240.29     38.5     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
458O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...1750.29     38.5     25     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
459Q54HW5    359   GNB1L_DICDI Guanine nucleotide-binding protei...890.29     38.5     27     55
460Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...970.3     38.9     25     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
461Q8T088    498   WDR55_DROME WD repeat-containing protein 55 h...1080.3     38.5     21     49
462A3LXF0    809   ERB1_PICST Ribosome biogenesis protein ERB1 O...1140.3     38.9     25     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
463Q5FW06    457   DCA10_XENTR DDB1- and CUL4-associated factor ...1140.3     38.5     25     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
464Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...770.31     38.9     27     48GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
465Q23256    501   YH92_CAEEL Uncharacterized WD repeat-containi...1130.31     38.5     23     45
466O35242    920   FAN_MOUSE Protein FAN OS=Mus musculus (Mouse)...1010.32     38.9     27     50
GO:0005123; F:death receptor binding; TAS:MGI.
467Q8CFD5    397   ERCC8_MOUSE DNA excision repair protein ERCC-...1300.32     38.5     26     41
GO:0009411; P:response to UV; IMP:MGI.::GO:0010165; P:response to X-ray; IMP:MGI.
468P49695    742   PKWA_THECU Probable serine/threonine-protein ...1070.34     38.5     23     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
469Q9QZD9    325   EIF3I_MOUSE Eukaryotic translation initiation...760.34     38.1     29     53GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
470O62621    914   COPB2_DROME Coatomer subunit beta' OS=Drosoph...1670.34     38.5     25     45GO:0030126; C:COPI vesicle coat; NAS:UniProtKB.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; NAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0010883; P:regulation of lipid storage; IDA:FlyBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; NAS:UniProtKB.
471P36037    715   DOA1_YEAST Protein DOA1 OS=Saccharomyces cere...780.34     38.5     32     50GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
472O42858    398   SWD1_SCHPO Set1 complex component swd1 OS=Sch...1030.34     38.1     29     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
473O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...710.35     38.5     32     51GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
474P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...1000.35     38.1     32     51GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
475Q5IH81    333   EIF3I_RABIT Eukaryotic translation initiation...760.35     38.1     29     53GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
476Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...760.35     38.1     29     53GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
477Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...880.36     38.1     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
478O95170    752   CDRT1_HUMAN CMT1A duplicated region transcrip...870.36     38.5     32     51
479Q9WVB2    767   TLE2_MOUSE Transducin-like enhancer protein 2...1110.36     38.5     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
480Q75DC5    827   ERB1_ASHGO Ribosome biogenesis protein ERB1 O...1140.36     38.5     25     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
481Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...1190.36     38.5     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
records
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