Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL183C
Length:
1013
Number of sequences:
5887
Description:
YPL183C RTT10 SGDID:S000006104, Chr XVI from 202536-199495, Genome Release 64-1-1, reverse complement, Verified ORF, "Cytoplasmic protein with a role in regulation of Ty1 transposition"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151O75529    589   TAF5L_HUMAN TAF5-like RNA polymerase II p300/...810.012     43.1     30     46GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
152Q20059    683   WDR48_CAEEL WD repeat-containing protein 48 h...2010.012     43.1     20     43
153Q758R7    715   MDV1_ASHGO Mitochondrial division protein 1 O...1300.012     43.1     30     50GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
154O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...910.012     43.5     26     47GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
155O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...470.013     43.1     36     64GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
156Q3MHE2    521   PRP4_BOVIN U4/U6 small nuclear ribonucleoprot...470.013     43.1     36     64GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
157Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...470.013     43.1     36     64GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
158Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...470.013     43.1     36     64GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
159Q965S8    327   EIF3I_CAEEL Eukaryotic translation initiation...760.013     42.7     25     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
160Q96JK2    942   DCAF5_HUMAN DDB1- and CUL4-associated factor ...1420.013     43.1     26     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
161P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...1530.013     42.7     25     40GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
162Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...2170.014     42.4     26     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
163O13282    643   TAF5_SCHPO Transcription initiation factor TF...1650.015     43.1     23     37GO:0005829; C:cytosol; IDA:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; IC:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IC:PomBase.
164O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...980.015     42.7     26     45GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
165B4P6P9    411   LIS1_DROYA Lissencephaly-1 homolog OS=Drosoph...870.015     42.7     30     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
166B3NPW0    411   LIS1_DROER Lissencephaly-1 homolog OS=Drosoph...870.015     42.7     30     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
167B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...1030.015     42.4     25     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
168Q80T85    946   DCAF5_MOUSE DDB1- and CUL4-associated factor ...1420.015     43.1     26     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005739; C:mitochondrion; IDA:MGI.
169Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...2340.015     42.4     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
170Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...1710.016     42.7     26     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
171Q7S7L4    486   LIS12_NEUCR Nuclear distribution protein pac1...1190.016     42.7     28     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
172Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...760.016     42.4     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
173B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...760.016     42.4     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
174A5DHI9    568   ATG18_PICGU Autophagy-related protein 18 OS=1...1030.016     42.7     24     56GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
175Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...1130.017     42.7     25     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
176Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...1130.017     42.7     25     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
177Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...1130.017     42.7     25     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
178Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...1130.017     42.7     25     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
179Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...1130.017     42.7     25     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
180Q3Y8L7    446   WDR69_CHLRE Outer row dynein assembly protein...1340.018     42.4     24     47GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
181Q39336    327   GBLP_BRANA Guanine nucleotide-binding protein...2190.018     42     26     43
records
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