Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL169C
Length:
599
Number of sequences:
5887
Description:
YPL169C MEX67 SGDID:S000006090, Chr XVI from 230838-229039, Genome Release 64-1-1, reverse complement, Verified ORF, "Poly(A)RNA binding protein involved in nuclear mRNA export, component of the nuclear pore; ortholog of human TAP"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q8AVC1    239   AN32B_XENLA Acidic leucine-rich nuclear phosp...1170.067     38.9     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
32Q5BGW9    230   RU2A_EMENI U2 small nuclear ribonucleoprotein...1160.12     38.1     27     44GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
33Q5A449    233   RU2A_CANAL U2 small nuclear ribonucleoprotein...660.12     38.1     36     62GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
34Q9BLB6    253   RU2A_CAEEL Probable U2 small nuclear ribonucl...1370.15     38.1     23     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
35Q92688    251   AN32B_HUMAN Acidic leucine-rich nuclear phosp...870.22     37.4     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
36P39937    518   PAC2_YEAST Protein PAC2 OS=Saccharomyces cere...360.22     38.1     47     75GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0043014; F:alpha-tubulin binding; IPI:SGD.
GO:0006457; P:protein folding; IGI:SGD.
37Q6P1U7    242   AN32B_XENTR Acidic leucine-rich nuclear phosp...870.25     37.4     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
38Q9XVS8    421   NXF2_CAEEL Nuclear RNA export factor 2 OS=Cae...3970.25     37.7     20     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
39Q755D2    237   RU2A_ASHGO U2 small nuclear ribonucleoprotein...670.36     37     34     54GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
40Q0P5X1    1673   LRIQ1_MOUSE Leucine-rich repeat and IQ domain...1060.36     37.7     25     46
41Q5Y2C3    388   H2AY_TETTS Histone H2A.Y OS=Tetrahymena therm...590.46     37     36     54GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
42P34390    461   YLS5_CAEEL Uncharacterized protein F09G8.5 OS...1030.48     37     29     51
43Q6BT60    238   RU2A_DEBHA U2 small nuclear ribonucleoprotein...1430.52     36.2     24     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
44Q5ZMN0    262   AN32B_CHICK Acidic leucine-rich nuclear phosp...930.54     36.2     32     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
45Q7Y180    272   AN322_ORYSJ Acidic leucine-rich nuclear phosp...1300.65     36.2     24     43
46Q4R803    357   PPR42_MACFA Protein phosphatase 1 regulatory ...930.7     36.2     29     47GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0002177; C:manchette; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.::GO:0045502; F:dynein binding; ISS:UniProtKB.::GO:0015631; F:tubulin binding; ISS:UniProtKB.
47Q9DAK8    192   LRC51_MOUSE Leucine-rich repeat-containing pr...860.77     35.4     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
48B6CZ61    192   LRC51_RAT Leucine-rich repeat-containing prot...860.82     35.4     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
49Q86QS6    275   AN32_SCHMA Acidic leucine-rich nuclear phosph...1190.9     35.8     24     50
50Q9USX8    239   RU2A_SCHPO U2 small nuclear ribonucleoprotein...840.96     35.4     30     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
51O43822    256   CU002_HUMAN Uncharacterized protein C21orf2 O...1151.1     35.4     28     43GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.
52Q5EAD8    192   LRC51_BOVIN Leucine-rich repeat-containing pr...861.2     35     31     44
53Q9V4Q8    265   RU2A_DROME Probable U2 small nuclear ribonucl...1221.2     35.4     26     44GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; ISS:FlyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007067; P:mitosis; IMP:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.
54Q9H069    523   LRC48_HUMAN Leucine-rich repeat-containing pr...931.2     35.8     28     54GO:0005737; C:cytoplasm; IDA:LIFEdb.
55Q5XIE0    258   AN32E_RAT Acidic leucine-rich nuclear phospho...841.2     35.4     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
56P97822    260   AN32E_MOUSE Acidic leucine-rich nuclear phosp...841.3     35     30     51GO:0016023; C:cytoplasmic membrane-bounded vesicle; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0019212; F:phosphatase inhibitor activity; IDA:MGI.
57P57784    255   RU2A_MOUSE U2 small nuclear ribonucleoprotein...1151.5     35     28     48
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
58Q4R8Y8    255   RU2A_MACFA U2 small nuclear ribonucleoprotein...1151.5     35     28     48GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
59P09661    255   RU2A_HUMAN U2 small nuclear ribonucleoprotein...1151.5     35     28     48GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005686; C:U2 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:HGNC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
60B3DH20    440   TILB_DANRE Protein TILB homolog OS=Danio reri...1191.8     35     27     48GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
61Q28XE2    263   AN32A_DROPS Acidic leucine-rich nuclear phosp...1141.8     34.7     32     45GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0006913; P:nucleocytoplasmic transport; ISS:UniProtKB.
records
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