Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL101W
Length:
456
Number of sequences:
5887
Description:
YPL101W ELP4 SGDID:S000006022, Chr XVI from 360209-361579, Genome Release 64-1-1, Verified ORF, "Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; required for Elongator structural integrity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02884    456   ELP4_YEAST Elongator complex protein 4 OS=Sac...4560     935     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0033588; C:Elongator holoenzyme complex; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006200; P:ATP catabolic process; IDA:GOC.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
2Q9USP1    361   ELP4_SCHPO Elongator complex protein 4 OS=Sch...4042e-16     83.6     25     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0033588; C:Elongator holoenzyme complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006400; P:tRNA modification; ISS:PomBase.
3Q9ER73    422   ELP4_MOUSE Elongator complex protein 4 OS=Mus...3950.00000000001     69.7     26     45GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0033588; C:Elongator holoenzyme complex; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q96EB1    424   ELP4_HUMAN Elongator complex protein 4 OS=Hom...3940.00000000006     67.8     26     42GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IDA:HGNC.::GO:0033588; C:Elongator holoenzyme complex; IDA:HGNC.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016573; P:histone acetylation; IDA:GOC.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IC:HGNC.
5Q2TBH6    423   ELP4_BOVIN Elongator complex protein 4 OS=Bos...3930.000000006     61.2     25     41GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0033588; C:Elongator holoenzyme complex; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q5XG58    408   ELP4_XENLA Elongator complex protein 4 OS=Xen...4310.000000008     61.2     24     40GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0033588; C:Elongator holoenzyme complex; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q566Y1    397   ELP4_DANRE Elongator complex protein 4 OS=Dan...4100.0000001     57.4     24     40GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0033588; C:Elongator holoenzyme complex; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9VMQ7    437   ELP4_DROME Putative elongator complex protein...590.00007     48.5     41     61GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0033588; C:Elongator holoenzyme complex; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q9C778    355   ELP4_ARATH Elongator complex protein 4 OS=Ara...1580.097     38.5     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033588; C:Elongator holoenzyme complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009734; P:auxin mediated signaling pathway; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; IMP:TAIR.::GO:0071329; P:cellular response to sucrose stimulus; IMP:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0031538; P:negative regulation of anthocyanin metabolic process; IMP:UniProtKB.::GO:0035265; P:organ growth; IMP:TAIR.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0010928; P:regulation of auxin mediated signaling pathway; IMP:UniProtKB.::GO:0043609; P:regulation of carbon utilization; IMP:UniProtKB.::GO:2000024; P:regulation of leaf development; IMP:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q18195    334   ELP4_CAEEL Putative elongator complex protein...3550.21     37.4     21     40GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0033588; C:Elongator holoenzyme complex; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:UniProtKB.
GO:0008607; F:phosphorylase kinase regulator activity; ISS:UniProtKB.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q05996    745   ZP2_HUMAN Zona pellucida sperm-binding protei...1400.37     37     22     41GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; ISS:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005771; C:multivesicular body; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0005578; C:proteinaceous extracellular matrix; IEA:UniProtKB-SubCell.::GO:0030141; C:secretory granule; ISS:UniProtKB.
GO:0032190; F:acrosin binding; IPI:UniProtKB.::GO:0015026; F:coreceptor activity; TAS:ProtInc.
GO:0007339; P:binding of sperm to zona pellucida; TAS:ProtInc.::GO:0006886; P:intracellular protein transport; ISS:UniProtKB.
12O77726    745   ZP2_MACRA Zona pellucida sperm-binding protei...1370.5     36.6     23     40GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; ISS:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005771; C:multivesicular body; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0005578; C:proteinaceous extracellular matrix; IEA:UniProtKB-SubCell.::GO:0030141; C:secretory granule; ISS:UniProtKB.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0006886; P:intracellular protein transport; ISS:UniProtKB.::GO:0007338; P:single fertilization; IEA:UniProtKB-KW.
13B3QSD5    357   RECA_CHLT3 Protein RecA OS=Chloroherpeton tha...753.1     33.9     33     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
14Q5R106    229   RNC_IDILO Ribonuclease 3 OS=Idiomarina loihie...723.3     33.5     25     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
15Q8LAL2    269   IAA26_ARATH Auxin-responsive protein IAA26 OS...1187.7     32.3     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0009734; P:auxin mediated signaling pathway; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q9ZJT0    253   AMPM_HELPJ Methionine aminopeptidase OS=Helic...977.8     32.3     28     49
GO:0004177; F:aminopeptidase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008235; F:metalloexopeptidase activity; IEA:InterPro.
GO:0009987; P:cellular process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
17Q54FQ2    3075   PKS30_DICDI Probable polyketide synthase 30 O...1588.3     32.7     23     43
GO:0000036; F:acyl carrier activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:InterPro.::GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0009058; P:biosynthetic process; IEA:InterPro.::GO:0006928; P:cellular component movement; IGI:dictyBase.
18Q62968    1956   SCNAA_RAT Sodium channel protein type 10 subu...479     32.7     40     47GO:0071439; C:clathrin complex; IDA:RGD.::GO:0001518; C:voltage-gated sodium channel complex; IEA:InterPro.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005248; F:voltage-gated sodium channel activity; IDA:RGD.
records
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