Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL082C
Length:
1867
Number of sequences:
5887
Description:
YPL082C MOT1 SGDID:S000006003, Chr XVI from 404083-398480, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential abundant protein involved in regulation of transcription, removes Spt15p (TBP) from DNA via its C-terminal ATPase activity, forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241A5F5C5    969   RAPA_VIBC3 RNA polymerase-associated protein ...683     36.6     28     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
242C3LR47    969   RAPA_VIBCM RNA polymerase-associated protein ...683.1     36.6     28     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
243Q9KP70    969   RAPA_VIBCH RNA polymerase-associated protein ...683.1     36.6     28     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
244Q2HG76    1134   MPH1_CHAGB ATP-dependent DNA helicase MPH1 OS...643.2     36.6     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
245B6EPV7    969   RAPA_ALISL RNA polymerase-associated protein ...783.6     36.2     26     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
246Q1MRE5    226   PIMT_LAWIP Protein-L-isoaspartate O-methyltra...343.8     35.4     41     71GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004719; F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; IEA:EC.
247P34689    763   GLH1_CAEEL ATP-dependent RNA helicase glh-1 O...994.2     35.8     24     49GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0017151; F:DEAD/H-box RNA helicase binding; IPI:WormBase.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0043621; F:protein self-association; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0009791; P:post-embryonic development; IMP:WormBase.
248A4KX71    944   HELI1_HVAVE Putative ATP-dependent RNA helica...955     35.8     31     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
249Q6FKS8    617   SPB4_CANGA ATP-dependent rRNA helicase SPB4 O...1085     35.8     25     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
250B5FGE9    969   RAPA_VIBFM RNA polymerase-associated protein ...785.3     35.8     26     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
251Q59S59    555   MRH4_CANAL ATP-dependent RNA helicase MRH4, m...1365.4     35.4     26     47GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
252Q5E881    952   RAPA_VIBF1 RNA polymerase-associated protein ...785.6     35.4     26     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
253Q9UT23    834   MFH1_SCHPO ATP-dependent DNA helicase mfh1 OS...985.6     35.4     24     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0071821; C:FANCM-MHF complex; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IC:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0009378; F:four-way junction helicase activity; IDA:PomBase.
GO:0006281; P:DNA repair; ISS:PomBase.::GO:0033567; P:DNA replication, Okazaki fragment processing; ISS:PomBase.::GO:2000042; P:negative regulation of double-strand break repair via homologous recombination; IMP:PomBase.::GO:0071932; P:replication fork reversal; IDA:PomBase.::GO:0000732; P:strand displacement; IDA:PomBase.
254Q7SDF3    1168   MPH1_NEUCR ATP-dependent DNA helicase mph-1 O...1296.3     35.4     23     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
255Q3MSQ8    724   DDX4_RANLE Probable ATP-dependent RNA helicas...1466.8     35.4     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0071546; C:pi-body; ISS:UniProtKB.::GO:0071547; C:piP-body; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
256Q5ADL0    884   PRP5_CANAL Pre-mRNA-processing ATP-dependent ...1479     35     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
records
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