Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL065W
Length:
242
Number of sequences:
5887
Description:
YPL065W VPS28 SGDID:S000005986, Chr XVI from 427927-428655, Genome Release 64-1-1, Verified ORF, "Component of the ESCRT-I complex (Stp22p, Srn2p, Vps28p, and Mvb12p), which is involved in ubiquitin-dependent sorting of proteins into the endosome; conserved C-terminal domain interacts with ESCRT-III subunit Vps20p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02767    242   VPS28_YEAST Vacuolar protein sorting-associat...2424e-176     491     100     100GO:0000813; C:ESCRT I complex; IDA:SGD.::GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
GO:0032403; F:protein complex binding; IDA:SGD.
GO:0006612; P:protein targeting to membrane; IMP:SGD.::GO:0006623; P:protein targeting to vacuole; IMP:SGD.::GO:0043162; P:ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IC:SGD.
2O13872    248   VPS28_SCHPO Vacuolar protein sorting-associat...2351e-41     148     35     59GO:0000813; C:ESCRT I complex; ISS:PomBase.::GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
GO:0006900; P:membrane budding; IC:PomBase.::GO:0043328; P:protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IMP:PomBase.
3Q9S9T7    210   VP282_ARATH Vacuolar protein sorting-associat...2242e-37     136     38     59GO:0000813; C:ESCRT I complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
4O65421    209   VP281_ARATH Vacuolar protein sorting-associat...2243e-34     127     37     59GO:0000813; C:ESCRT I complex; ISS:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005802; C:trans-Golgi network; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5Q9UK41    221   VPS28_HUMAN Vacuolar protein sorting-associat...2262e-30     118     30     54GO:0005829; C:cytosol; IDA:MGI.::GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0031397; P:negative regulation of protein ubiquitination; IDA:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
6Q9V359    210   VPS28_DROME Vacuolar protein sorting-associat...2322e-30     117     31     52GO:0005768; C:endosome; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:FlyBase.
GO:0030036; P:actin cytoskeleton organization; IMP:FlyBase.::GO:0048749; P:compound eye development; IMP:FlyBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:FlyBase.::GO:0044130; P:negative regulation of growth of symbiont in host; IMP:FlyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010797; P:regulation of multivesicular body size involved in endosome transport; IDA:FlyBase.::GO:0007291; P:sperm individualization; IMP:FlyBase.
7Q54NF1    288   VPS28_DICDI Vacuolar protein sorting-associat...2212e-30     119     35     55GO:0000813; C:ESCRT I complex; ISS:dictyBase.::GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
GO:0006605; P:protein targeting; ISS:dictyBase.
8B5DEN9    228   VPS28_RAT Vacuolar protein sorting-associated...2265e-30     117     30     53GO:0005768; C:endosome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9Q9D1C8    221   VPS28_MOUSE Vacuolar protein sorting-associat...2266e-30     116     30     53GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
10Q3T178    221   VPS28_BOVIN Vacuolar protein sorting-associat...2266e-30     116     30     53GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
11A8XWB7    209   VPS28_CAEBR Vacuolar protein sorting-associat...2374e-23     98.2     29     51GO:0005768; C:endosome; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
12Q9NA26    210   VPS28_CAEEL Vacuolar protein sorting-associat...2191e-22     96.7     29     51GO:0005768; C:endosome; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0030163; P:protein catabolic process; IMP:WormBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0032801; P:receptor catabolic process; IMP:WormBase.
13Q86XX4    4007   FRAS1_HUMAN Extracellular matrix protein FRAS...1051.5     33.9     27     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007154; P:cell communication; IEA:InterPro.
14Q61333    691   TNAP2_MOUSE Tumor necrosis factor alpha-induc...1232.3     33.1     24     46
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
15P57899    385   GAL1_PASMU Galactokinase OS=Pasteurella multo...382.8     32.7     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004335; F:galactokinase activity; IEA:EC.
GO:0006012; P:galactose metabolic process; IEA:UniProtKB-KW.
16P06601    613   PRD_DROME Segmentation protein paired OS=Dros...473     32.7     34     60GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:FlyBase.::GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:FlyBase.
GO:0007366; P:periodic partitioning by pair rule gene; NAS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.
records
Previous ‹‹ ›› Next Total records: 16 1 - 16
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::