Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL054W
Length:
301
Number of sequences:
5887
Description:
YPL054W LEE1 SGDID:S000005975, Chr XVI from 455759-456664, Genome Release 64-1-1, Verified ORF, "Zinc-finger protein of unknown function"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q9UTD1    170   YTH1_SCHPO mRNA 3'-end-processing protein yth...722     32.7     29     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; IC:PomBase.
92O75152    810   ZC11A_HUMAN Zinc finger CCCH domain-containin...512.1     33.9     35     41
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
93P26651    326   TTP_HUMAN Tristetraprolin OS=Homo sapiens (Hu...542.1     33.5     31     54GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0071889; F:14-3-3 protein binding; IDA:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0019957; F:C-C chemokine binding; IPI:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; IDA:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; IDA:UniProtKB.::GO:0006950; P:response to stress; IDA:UniProtKB.
94Q6L4N4    402   C3H35_ORYSJ Zinc finger CCCH domain-containin...782.4     33.5     27     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
95O74823    377   YBJC_SCHPO Zinc finger CCCH domain-containing...672.7     33.1     34     49GO:0005634; C:nucleus; IDA:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
96P22893    319   TTP_MOUSE Tristetraprolin OS=Mus musculus (Mo...513.3     32.7     31     51GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0007243; P:intracellular protein kinase cascade; IDA:MGI.::GO:0050728; P:negative regulation of inflammatory response; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:MGI.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0050779; P:RNA destabilization; IMP:MGI.
97Q5NAW2    476   C3H6_ORYSJ Zinc finger CCCH domain-containing...853.4     33.1     26     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
98Q5F3Z9    730   ZC3HE_CHICK Zinc finger CCCH domain-containin...883.4     33.1     28     42GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
99A4IGY3    426   ZC3HF_XENTR Zinc finger CCCH domain-containin...264     32.7     46     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
100A7SBN6    508   ZGPAT_NEMVE Zinc finger CCCH-type with G patc...524     32.7     35     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
101Q9H0J9    701   PAR12_HUMAN Poly [ADP-ribose] polymerase 12 O...364.2     32.7     33     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003950; F:NAD+ ADP-ribosyltransferase activity; IEA:EC.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
102Q187T6    947   MUTS_CLOD6 DNA mismatch repair protein MutS O...534.2     32.7     32     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
103A8GM71    385   ACKA_RICAH Acetate kinase OS=Rickettsia akari...1164.4     32.3     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008776; F:acetate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006082; P:organic acid metabolic process; IEA:InterPro.
104Q9LXV4    706   C3H56_ARATH Zinc finger CCCH domain-containin...514.5     32.7     33     49GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.
105Q7SGR2    317   YTH1_NEUCR mRNA 3'-end-processing protein yth...604.7     32.3     30     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
106Q2QT65    454   C3H66_ORYSJ Zinc finger CCCH domain-containin...1076.5     32     25     41
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
107Q84VG7    587   C3H27_ARATH Zinc finger CCCH domain-containin...805.2     32.3     31     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0010220; P:positive regulation of vernalization response; IGI:TAIR.
108Q9M0G2    356   C3H49_ARATH Zinc finger CCCH domain-containin...635.6     32     27     43
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:TAIR.
109Q9FU27    386   C3H2_ORYSJ Zinc finger CCCH domain-containing...1085.9     32     23     41GO:0005634; C:nucleus; IDA:Gramene.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IC:Gramene.
GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:Gramene.::GO:0010150; P:leaf senescence; IMP:Gramene.
110Q0DYP5    435   C3H17_ORYSJ Zinc finger CCCH domain-containin...206.3     32     50     65
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
111Q28H71    514   ZGPAT_XENTR Zinc finger CCCH-type with G patc...516.5     32     31     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007175; P:negative regulation of epidermal growth factor-activated receptor activity; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
112Q9LUZ4    607   C3H66_ARATH Zinc finger CCCH domain-containin...256.6     32     44     64
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.
113Q93ZS9    580   C3H47_ARATH Zinc finger CCCH domain-containin...256.6     32     44     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
114Q5FVW4    449   NUPL2_XENTR Nucleoporin-like protein 2 OS=Xen...197.1     32     47     68GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
115Q9XEE6    597   C3H29_ARATH Zinc finger CCCH domain-containin...247.3     32     46     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.
116P0CR50    326   SLT11_CRYNJ Pre-mRNA-splicing factor SLT11 OS...357.5     31.6     31     57GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
117P0CR51    326   SLT11_CRYNB Pre-mRNA-splicing factor SLT11 OS...357.5     31.6     31     57GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
118Q7XT07    685   DUS3L_ORYSJ tRNA-dihydrouridine(47) synthase ...637.7     32     35     48
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
119Q5XGN1    491   NUPL2_XENLA Nucleoporin-like protein 2 OS=Xen...197.7     32     47     68GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
120P53781    324   TTP_BOVIN Tristetraprolin OS=Bos taurus (Bovi...547.7     31.6     30     54GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.
121Q69NK8    613   C3H59_ORYSJ Zinc finger CCCH domain-containin...638.3     32     30     44
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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