Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL054W
Length:
301
Number of sequences:
5887
Description:
YPL054W LEE1 SGDID:S000005975, Chr XVI from 455759-456664, Genome Release 64-1-1, Verified ORF, "Zinc-finger protein of unknown function"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q5BGN2    254   YTH1_EMENI mRNA 3'-end-processing protein yth...966.5     31.6     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
62Q6P5D3    1388   DHX57_MOUSE Putative ATP-dependent RNA helica...220.32     36.6     59     77
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
63Q1EHT7    1007   C3H4_ORYSJ Zinc finger CCCH domain-containing...510.3     36.6     41     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
64Q8GW05    388   C3H47_ORYSJ Zinc finger CCCH domain-containin...590.34     36.2     29     44
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
65Q6NPN3    465   C3H58_ARATH Zinc finger CCCH domain-containin...750.6     35.4     28     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
66Q2URI6    255   YTH1_ASPOR mRNA 3'-end-processing protein yth...965.9     32     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
67Q8BZ20    711   PAR12_MOUSE Poly [ADP-ribose] polymerase 12 O...500.56     35.4     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003950; F:NAD+ ADP-ribosyltransferase activity; IEA:EC.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
68Q7JWR9    404   ZC3HF_DROME Zinc finger CCCH domain-containin...1390.62     35     22     32
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
69Q94AD9    404   C3H3_ARATH Zinc finger CCCH domain-containing...632.3     33.5     35     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
70O22243    1015   C3H31_ARATH Zinc finger CCCH domain-containin...600.71     35.4     32     47GO:0009507; C:chloroplast; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
71Q28Y69    406   ZC3HF_DROPS Zinc finger CCCH domain-containin...1500.71     35     23     33
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
72Q8WU90    426   ZC3HF_HUMAN Zinc finger CCCH domain-containin...260.92     34.7     50     50GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
73O74315    475   AMO1_SCHPO Nucleoporin-like protein amo1 OS=S...430.95     34.7     40     53GO:0031965; C:nuclear membrane; IDA:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0031122; P:cytoplasmic microtubule organization; IMP:PomBase.::GO:0040023; P:establishment of nucleus localization; IMP:PomBase.::GO:0030951; P:establishment or maintenance of microtubule cytoskeleton polarity; IMP:PomBase.::GO:0031115; P:negative regulation of microtubule polymerization; IMP:PomBase.
74Q803J8    433   ZC3HF_DANRE Zinc finger CCCH domain-containin...260.95     34.7     50     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
75Q1RMM1    426   ZC3HF_BOVIN Zinc finger CCCH domain-containin...261     34.7     50     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
76Q6U6G5    426   ZC3HF_RAT Zinc finger CCCH domain-containing ...261.1     34.7     50     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
77Q758T3    209   YTH1_ASHGO mRNA 3'-end-processing protein YTH...501.1     33.9     32     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
78Q3TIV5    426   ZC3HF_MOUSE Zinc finger CCCH domain-containin...261.1     34.7     50     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0019221; P:cytokine-mediated signaling pathway; IDA:MGI.
79Q5TYQ8    669   ZC3HE_DANRE Zinc finger CCCH domain-containin...711.2     34.7     31     46GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:InterPro.
80Q9ZUM0    669   C3H17_ARATH Zinc finger CCCH domain-containin...231.3     34.3     52     61
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
81Q6DD06    426   ZC3HF_XENLA Zinc finger CCCH domain-containin...261.3     34.3     50     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
82Q5H7N8    429   ZC3HF_CHICK Zinc finger CCCH domain-containin...261.4     34.3     50     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
83Q941Q3    524   C3H37_ARATH Zinc finger CCCH domain-containin...1351.4     34.3     25     35GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0001709; P:cell fate determination; TAS:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
84Q8CIC2    420   NUPL2_MOUSE Nucleoporin-like protein 2 OS=Mus...191.5     33.9     47     79GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
85Q8IXZ2    948   ZC3H3_HUMAN Zinc finger CCCH domain-containin...697.4     32     23     42GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB.
86Q9SV09    540   C3H46_ARATH Zinc finger CCCH domain-containin...381.5     34.3     37     58
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
87Q9SK49    497   C3H22_ARATH Zinc finger CCCH domain-containin...341.7     33.9     50     59
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
88P22293    1325   SUS_DROME Protein suppressor of sable OS=Dros...541.8     33.9     31     43GO:0005654; C:nucleoplasm; IDA:FlyBase.
GO:0003723; F:RNA binding; IDA:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071027; P:nuclear RNA surveillance; IMP:FlyBase.
89Q5RB98    423   NUPL2_PONAB Nucleoporin-like protein 2 OS=Pon...191.9     33.9     47     79GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
90O15504    423   NUPL2_HUMAN Nucleoporin-like protein 2 OS=Hom...191.9     33.9     47     79GO:0005829; C:cytosol; TAS:Reactome.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0005049; F:nuclear export signal receptor activity; TAS:ProtInc.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
91Q9UTD1    170   YTH1_SCHPO mRNA 3'-end-processing protein yth...722     32.7     29     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; IC:PomBase.
records
Previous ‹‹ ›› Next Total records: 123 61 - 90
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::