Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL054W
Length:
301
Number of sequences:
5887
Description:
YPL054W LEE1 SGDID:S000005975, Chr XVI from 455759-456664, Genome Release 64-1-1, Verified ORF, "Zinc-finger protein of unknown function"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q66KE3    269   CPSF4_XENTR Cleavage and polyadenylation spec...500.007     41.2     38     52GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
32Q9SWF9    417   ZFNL_PEA Zinc finger CCCH domain-containing p...622.6     33.1     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
33P61129    1189   ZC3H6_HUMAN Zinc finger CCCH domain-containin...510.75     35.4     33     47
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
34A3BUD2    605   C3H57_ORYSJ Putative zinc finger CCCH domain-...930.021     40     26     46
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
35Q6IDS6    323   C3H35_ARATH E3 ubiquitin-protein ligase makor...530.024     39.3     40     57
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
36Q9JJ48    305   ZC3H8_MOUSE Zinc finger CCCH domain-containin...500.032     38.9     34     44GO:0005634; C:nucleus; IDA:MGI.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; ISS:UniProtKB.::GO:0046677; P:response to antibiotic; ISS:UniProtKB.::GO:0043029; P:T cell homeostasis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37Q3TX08    663   TRM1_MOUSE tRNA (guanine(26)-N(2))-dimethyltr...460.033     39.3     35     54
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0004809; F:tRNA (guanine-N2-)-methyltransferase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
38Q4IPA4    411   YTH1_GIBZE mRNA 3'-end-processing protein YTH...550.042     38.9     38     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
39A6NMK7    179   CPS4L_HUMAN Putative cleavage and polyadenyla...500.044     38.1     36     48
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
40Q5JLB5    439   C3H12_ORYSJ Zinc finger CCCH domain-containin...628.5     31.6     35     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
41Q9UPT8    1303   ZC3H4_HUMAN Zinc finger CCCH domain-containin...600.076     38.5     35     40
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
42Q8N5P1    291   ZC3H8_HUMAN Zinc finger CCCH domain-containin...526.9     31.6     33     44GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; IMP:UniProtKB.::GO:0046677; P:response to antibiotic; IDA:UniProtKB.::GO:0043029; P:T cell homeostasis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q8CHP0    950   ZC3H3_MOUSE Zinc finger CCCH domain-containin...520.14     37.4     38     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; ISS:UniProtKB.
44Q6ZPZ3    1304   ZC3H4_MOUSE Zinc finger CCCH domain-containin...600.095     38.1     35     40
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
45Q0JHZ2    366   C3H11_ORYSJ Zinc finger CCCH domain-containin...760.11     37.4     26     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
46Q9NXH9    659   TRM1_HUMAN tRNA (guanine(26)-N(2))-dimethyltr...350.11     37.7     43     57
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0004809; F:tRNA (guanine-N2-)-methyltransferase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
47Q6P158    1386   DHX57_HUMAN Putative ATP-dependent RNA helica...194.9     32.7     58     68
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
48Q5RJC5    435   C3H67_ARATH Zinc finger CCCH domain-containin...680.66     35     29     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
49Q9SQU4    462   C3H34_ARATH Zinc finger CCCH domain-containin...803.4     33.1     29     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
50Q6YYC0    958   C3H55_ORYSJ Zinc finger CCCH domain-containin...1240.14     37.4     25     38
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
51Q12000    345   TMA46_YEAST Translation machinery-associated ...1190.15     37     26     34GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
52Q5ZI22    413   NUPL2_CHICK Nucleoporin-like protein 2 OS=Gal...330.18     37     36     64GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
53P47973    320   TTP_RAT Tristetraprolin OS=Rattus norvegicus ...510.19     36.6     33     53GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; TAS:RGD.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.
54Q8L7N8    375   C3H57_ARATH Zinc finger CCCH domain-containin...680.2     36.6     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; TAS:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
55Q9SK74    371   C3H21_ARATH Zinc finger CCCH domain-containin...290.2     36.6     48     59
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
56Q2R4J4    444   C3H63_ORYSJ Zinc finger CCCH domain-containin...1070.3     36.2     27     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
57Q0J952    711   C3H32_ORYSJ Zinc finger CCCH domain-containin...705.6     32.3     30     39
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
58Q4WKD9    254   YTH1_ASPFU mRNA 3'-end-processing protein yth...690.23     36.2     35     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
59Q9STM4    448   C3H43_ARATH Zinc finger CCCH domain-containin...961.4     34.3     25     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
60Q8GXX7    397   C3H33_ARATH Zinc finger CCCH domain-containin...1182     33.5     26     42GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; TAS:TAIR.::GO:0048027; F:mRNA 5'-UTR binding; IPI:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0010313; F:phytochrome binding; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0017148; P:negative regulation of translation; IMP:TAIR.
61Q5BGN2    254   YTH1_EMENI mRNA 3'-end-processing protein yth...966.5     31.6     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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