Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL016W
Length:
1314
Number of sequences:
5887
Description:
YPL016W SWI1 SGDID:S000005937, Chr XVI from 521014-524958, Genome Release 64-1-1, Verified ORF, "Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; can form the prion [SWI+]"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q9BY66    1539   KDM5D_HUMAN Lysine-specific demethylase 5D OS...640.07     41.2     31     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0032453; F:histone demethylase activity (H3-K4 specific); IDA:MGI.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007283; P:spermatogenesis; NAS:UniProtKB.
32Q5XUN4    1535   KDM5D_PANTR Lysine-specific demethylase 5D OS...640.075     41.2     31     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
33P29375    1690   KDM5A_HUMAN Lysine-specific demethylase 5A OS...640.08     41.2     36     53GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:GDB.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
34Q5F3R2    1522   KDM5B_CHICK Lysine-specific demethylase 5B OS...630.081     41.2     32     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0034648; F:histone demethylase activity (H3-dimethyl-K4 specific); ISS:UniProtKB.::GO:0034647; F:histone demethylase activity (H3-trimethyl-K4 specific); ISS:UniProtKB.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
35P17429    876   AREA_EMENI Nitrogen regulatory protein areA O...880.084     40.8     31     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36Q8BRM2    368   GORAB_MOUSE RAB6-interacting golgin OS=Mus mu...1780.11     40     24     47GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:HGNC.
37Q62240    1548   KDM5D_MOUSE Lysine-specific demethylase 5D OS...640.12     40.4     31     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
38O14497    2285   ARI1A_HUMAN AT-rich interactive domain-contai...780.13     40.4     24     59GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.
GO:0030521; P:androgen receptor signaling pathway; IDA:UniProtKB.::GO:0048096; P:chromatin-mediated maintenance of transcription; TAS:UniProtKB.::GO:0042921; P:glucocorticoid receptor signaling pathway; IDA:UniProtKB.::GO:0030520; P:intracellular estrogen receptor signaling pathway; IDA:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0042766; P:nucleosome mobilization; TAS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39A2BH40    2283   ARI1A_MOUSE AT-rich interactive domain-contai...780.13     40.4     24     59GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:MGI.::GO:0016514; C:SWI/SNF complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0030521; P:androgen receptor signaling pathway; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030520; P:intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q4H3P5    571   DRI_CIOIN Protein dead ringer homolog OS=Cion...1120.14     40     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41Q3UXZ9    1690   KDM5A_MOUSE Lysine-specific demethylase 5A OS...640.15     40.4     36     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q92833    1246   JARD2_HUMAN Protein Jumonji OS=Homo sapiens (...800.15     40     30     51
GO:0003682; F:chromatin binding; ISS:UniProtKB.
GO:0007417; P:central nervous system development; TAS:ProtInc.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0031061; P:negative regulation of histone methylation; ISS:UniProtKB.::GO:0051574; P:positive regulation of histone H3-K9 methylation; ISS:UniProtKB.::GO:0048863; P:stem cell differentiation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q62315    1234   JARD2_MOUSE Protein Jumonji OS=Mus musculus (...800.17     40     30     51
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; TAS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0001889; P:liver development; IMP:MGI.::GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.::GO:0031061; P:negative regulation of histone methylation; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IDA:UniProtKB.::GO:0048536; P:spleen development; IMP:MGI.::GO:0048863; P:stem cell differentiation; IMP:UniProtKB.::GO:0048538; P:thymus development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44A6PWV5    409   ARI3C_MOUSE AT-rich interactive domain-contai...1510.21     39.3     25     41GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45A6NKF2    412   ARI3C_HUMAN AT-rich interactive domain-contai...830.26     38.9     28     47GO:0045121; C:membrane raft; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46Q3UFY0    244   RRP36_MOUSE Ribosomal RNA processing protein ...840.27     38.5     31     46GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042274; P:ribosomal small subunit biogenesis; ISS:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.
47Q5F363    1233   JARD2_CHICK Protein Jumonji OS=Gallus gallus ...740.28     39.3     28     51GO:0035097; C:histone methyltransferase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0031061; P:negative regulation of histone methylation; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0051574; P:positive regulation of histone H3-K9 methylation; ISS:UniProtKB.::GO:0048863; P:stem cell differentiation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48P29374    1257   ARI4A_HUMAN AT-rich interactive domain-contai...1460.29     39.3     23     42GO:0017053; C:transcriptional repressor complex; IDA:GDB.
GO:0003677; F:DNA binding; IDA:GDB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:GDB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
49Q24573    911   DRI_DROME Protein dead ringer OS=Drosophila m...830.31     39.3     28     45GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0070491; F:repressing transcription factor binding; IPI:FlyBase.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:FlyBase.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IDA:FlyBase.
GO:0009952; P:anterior/posterior pattern specification; IMP:FlyBase.::GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0009880; P:embryonic pattern specification; IMP:FlyBase.::GO:0042063; P:gliogenesis; IMP:UniProtKB.::GO:0008049; P:male courtship behavior; IMP:FlyBase.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0045924; P:regulation of female receptivity; IMP:FlyBase.::GO:0007435; P:salivary gland morphogenesis; NAS:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50Q96EU6    259   RRP36_HUMAN Ribosomal RNA processing protein ...840.86     37     31     46GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0042274; P:ribosomal small subunit biogenesis; IDA:UniProtKB.::GO:0006364; P:rRNA processing; IDA:UniProtKB.
51Q1MTN9    544   RLF2_SCHPO Chromatin assembly factor 1 subuni...1361.4     37     29     48GO:0033186; C:CAF-1 complex; IDA:PomBase.::GO:0016585; C:chromatin remodeling complex; NAS:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0006335; P:DNA replication-dependent nucleosome assembly; IC:PomBase.::GO:0070829; P:heterochromatin maintenance; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0090053; P:positive regulation of chromatin silencing at centromere; IMP:PomBase.::GO:0090055; P:positive regulation of chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:PomBase.::GO:0034504; P:protein localization to nucleus; IGI:PomBase.
52Q6DGZ0    262   CCD75_DANRE Coiled-coil domain-containing pro...621.5     36.2     32     55
GO:0003676; F:nucleic acid binding; IEA:InterPro.
53Q8IVW6    561   ARI3B_HUMAN AT-rich interactive domain-contai...961.6     36.6     27     45GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
54Q8IDX6    3130   RBP2A_PLAF7 Reticulocyte-binding protein 2 ho...912.2     36.6     24     58GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016337; P:cell-cell adhesion; ISS:UniProtKB.
55Q9C7P4    321   C3H9_ARATH Putative zinc finger CCCH domain-c...822.4     35.8     28     55
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
56C0H5F4    3179   RBP2B_PLAF7 Reticulocyte binding protein 2 ho...962.5     36.2     28     57GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016337; P:cell-cell adhesion; ISS:UniProtKB.::GO:0030260; P:entry into host cell; TAS:GeneDB_Pfalciparum.
57Q9Z1N7    568   ARI3B_MOUSE AT-rich interactive domain-contai...962.8     35.8     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
58A2R7P5    1201   NST1_ASPNC Stress response protein nst1 OS=As...603.3     35.8     37     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
59O14012    203   RRP17_SCHPO Ribosomal RNA-processing protein ...653.6     34.7     35     57GO:0005954; C:calcium- and calmodulin-dependent protein kinase complex; TAS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0004527; F:exonuclease activity; ISS:PomBase.
GO:0000967; P:rRNA 5'-end processing; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.
60P94517    221   YSCB_BACSU Uncharacterized protein yscB OS=Ba...703.8     34.7     27     61
61P29362    404   LMP1_EBVC Latent membrane protein 1 OS=Epstei...1064.9     35     23     43GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0019087; P:transformation of host cell by virus; IEA:InterPro.
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