Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL016W
Length:
1314
Number of sequences:
5887
Description:
YPL016W SWI1 SGDID:S000005937, Chr XVI from 521014-524958, Genome Release 64-1-1, Verified ORF, "Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; can form the prion [SWI+]"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P09547    1314   SWI1_YEAST SWI/SNF chromatin-remodeling compl...13140     2610     100     100GO:0016514; C:SWI/SNF complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0001102; F:RNA polymerase II activating transcription factor binding; IMP:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0000436; P:carbon catabolite activation of transcription from RNA polymerase II promoter; IGI:SGD.::GO:0044109; P:cellular alcohol catabolic process; IMP:SGD.::GO:0006261; P:DNA-dependent DNA replication; IMP:SGD.::GO:0031496; P:positive regulation of mating type switching; IMP:SGD.::GO:0061412; P:positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation; IMP:SGD.::GO:0005987; P:sucrose catabolic process; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q8BM75    1188   ARI5B_MOUSE AT-rich interactive domain-contai...920.0000002     60.1     30     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0030325; P:adrenal gland development; IMP:MGI.::GO:0048468; P:cell development; IMP:MGI.::GO:0060325; P:face morphogenesis; IMP:MGI.::GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0060613; P:fat pad development; IMP:MGI.::GO:0008585; P:female gonad development; IMP:MGI.::GO:0010761; P:fibroblast migration; IMP:MGI.::GO:0001822; P:kidney development; IMP:MGI.::GO:0008584; P:male gonad development; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0048644; P:muscle organ morphogenesis; IMP:MGI.::GO:0060021; P:palate development; IMP:MGI.::GO:0048008; P:platelet-derived growth factor receptor signaling pathway; IMP:MGI.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IMP:MGI.::GO:0009791; P:post-embryonic development; IMP:MGI.::GO:0048705; P:skeletal system morphogenesis; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3E1BLP6    1173   ARI5B_BOVIN AT-rich interactive domain-contai...900.0000002     59.7     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0060612; P:adipose tissue development; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q14865    1188   ARI5B_HUMAN AT-rich interactive domain-contai...900.0000002     59.7     31     53GO:0005634; C:nucleus; IC:GDB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0001889; P:liver development; TAS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; TAS:GDB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q5ZJ69    1185   ARI5B_CHICK AT-rich interactive domain-contai...900.0000002     59.7     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0060612; P:adipose tissue development; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6E2R9X2    1187   ARI5B_CANFA AT-rich interactive domain-contai...900.0000002     59.3     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0060612; P:adipose tissue development; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7O74365    865   SOL1_SCHPO SWI/SNF chromatin-remodeling compl...630.04     42     37     56GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:PomBase.
8E7F888    1044   ARI5B_DANRE AT-rich interactive domain-contai...900.000001     57     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0060612; P:adipose tissue development; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q3U108    590   ARI5A_MOUSE AT-rich interactive domain-contai...900.000004     55.1     31     54
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q03989    594   ARI5A_HUMAN AT-rich interactive domain-contai...900.000004     54.7     31     54GO:0005730; C:nucleolus; IDA:HPA.
GO:0003677; F:DNA binding; TAS:GDB.
GO:0045892; P:negative regulation of transcription, DNA-dependent; TAS:GDB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q3SWY1    592   ARI5A_BOVIN AT-rich interactive domain-contai...900.000009     53.9     31     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q940Y3    786   ARID3_ARATH AT-rich interactive domain-contai...890.0002     49.7     29     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q8NFD5    2236   ARI1B_HUMAN AT-rich interactive domain-contai...990.0002     49.7     28     55GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IDA:GDB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; NAS:UniProtKB.
GO:0048096; P:chromatin-mediated maintenance of transcription; NAS:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q9VMJ7    1838   KDM5_DROME Lysine-specific demethylase lid OS...640.0003     48.9     36     63GO:0070822; C:Sin3-type complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0043992; F:histone acetyltransferase activity (H3-K9 specific); IMP:FlyBase.::GO:0034647; F:histone demethylase activity (H3-trimethyl-K4 specific); IMP:FlyBase.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q4LE39    1312   ARI4B_HUMAN AT-rich interactive domain-contai...600.002     46.2     37     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q9JKB5    1228   ARI4B_RAT AT-rich interactive domain-containi...600.002     46.2     37     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17A2CG63    1314   ARI4B_MOUSE AT-rich interactive domain-contai...600.002     46.2     37     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q62431    601   ARI3A_MOUSE AT-rich interactive domain-contai...830.005     44.7     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0042803; F:protein homodimerization activity; IPI:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q99856    593   ARI3A_HUMAN AT-rich interactive domain-contai...830.011     43.9     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0045121; C:membrane raft; IDA:MGI.::GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20Q5XGD9    541   ARI3A_XENTR AT-rich interactive domain-contai...1350.014     43.5     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21Q8MQH7    490   DRI_STRPU Protein dead ringer homolog OS=Stro...960.015     43.1     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22Q6GQD7    539   ARI3A_XENLA AT-rich interactive domain-contai...830.017     43.1     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q68CP9    1835   ARID2_HUMAN AT-rich interactive domain-contai...840.019     43.1     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:GDB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...924.6     35.4     21     59GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
25Q30DN6    1545   KDM5D_CANFA Lysine-specific demethylase 5D OS...640.035     42.4     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
26Q8IN94    2716   OSA_DROME Trithorax group protein osa OS=Dros...920.035     42.4     27     50GO:0035060; C:brahma complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007480; P:imaginal disc-derived leg morphogenesis; IMP:FlyBase.::GO:0008587; P:imaginal disc-derived wing margin morphogenesis; IMP:UniProtKB.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0046530; P:photoreceptor cell differentiation; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:FlyBase.::GO:0042058; P:regulation of epidermal growth factor receptor signaling pathway; IMP:FlyBase.::GO:0007379; P:segment specification; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0048190; P:wing disc dorsal/ventral pattern formation; IGI:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
27P41229    1560   KDM5C_HUMAN Lysine-specific demethylase 5C OS...660.039     42.4     32     58GO:0005634; C:nucleus; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0032453; F:histone demethylase activity (H3-K4 specific); IDA:MGI.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q38JA7    1556   KDM5C_CANFA Lysine-specific demethylase 5C OS...660.046     42     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
29A2BEA6    570   ARI3A_DANRE AT-rich interactive domain-contai...1410.053     41.6     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
30P41230    1554   KDM5C_MOUSE Lysine-specific demethylase 5C OS...660.054     41.6     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31Q9BY66    1539   KDM5D_HUMAN Lysine-specific demethylase 5D OS...640.07     41.2     31     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0032453; F:histone demethylase activity (H3-K4 specific); IDA:MGI.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007283; P:spermatogenesis; NAS:UniProtKB.
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