FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YPL008W

Length:

861

Number of sequences:

5887

Description:

YPL008W CHL1 SGDID:S000005929, Chr XVI from 539385-541970, Genome Release 64-1-1, Verified ORF, "Probable DNA helicase involved in sister-chromatid cohesion and genome integrity; interacts with ECO1 and CTF18; mutants are defective in silencing, rDNA recombination, aging and the heat shock response; FANCJ-like helicase family member"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
61	Q4JC68	551	XPD_SULAC ATP-dependent DNA helicase Saci_019...	49	0.001	46.2	41	61
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
62	P29741	692	DING_PHOPR Probable ATP-dependent helicase di...	528	0.0001	49.3	22	38
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
63	Q58352	651	Y942_METJA Probable ATP-dependent helicase MJ...	105	0.006	43.9	29	48
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.

64	Q49XR1	900	DING_STAS1 Probable ATP-dependent helicase di...	111	0.57	37.7	28	39	GO:0005622; C:intracellular; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.::GO:0004527; F:exonuclease activity; IEA:InterPro.
									GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:InterPro.
65	B3WCQ5	671	UVRB_LACCB UvrABC system protein B OS=Lactoba...	40	2.2	35.8	43	58	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
66	Q03AL7	671	UVRB_LACC3 UvrABC system protein B OS=Lactoba...	40	2.2	35.8	43	58	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
67	A6LSN4	270	RNH2_CLOB8 Ribonuclease HII OS=acetobutylicum...	85	2.9	34.7	29	53	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.

68	O52027	644	ARSA_HALSA Putative arsenical pump-driving AT...	116	5.3	34.3	30	41
									GO:0015446; F:arsenite-transmembrane transporting ATPase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
									GO:0071722; P:detoxification of arsenic-containing substance; IEA:InterPro.

records

‹‹

››

Total records:

61 - 68

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::