Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR341W
Length:
1664
Number of sequences:
5887
Description:
YOR341W RPA190 SGDID:S000005868, Chr XV from 960987-965981, Genome Release 64-1-1, Verified ORF, "RNA polymerase I largest subunit A190"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P17546    1766   RPB1A_TRYBB DNA-directed RNA polymerase II su...580.012     44.3     36     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
32P17545    1766   RPB1B_TRYBB DNA-directed RNA polymerase II su...580.012     44.3     36     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
33P41556    889   RPOA1_METVS DNA-directed RNA polymerase subun...1210.000000000007     74.3     33     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
34O27125    870   RPOA1_METTH DNA-directed RNA polymerase subun...1140.0000000000002     79.3     33     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
35P28363    638   RPA1_EUPOC DNA-directed RNA polymerase I subu...6684e-87     304     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
36P0CX02    971   RPOA1_HALSA DNA-directed RNA polymerase subun...1100.00000000006     71.2     35     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
37B0R8D4    971   RPOA1_HALS3 DNA-directed RNA polymerase subun...1100.00000000006     71.2     35     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
38Q03585    885   RPOA1_THEAC DNA-directed RNA polymerase subun...1280.000000000000002     85.9     34     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
39P25202    1741   RPC1_GIAIN DNA-directed RNA polymerase III su...1040.000000002     66.2     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
40P09846    865   RPOA1_METTW DNA-directed RNA polymerase subun...1180.00000000003     72     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
41P27625    2339   RPC1_PLAFA DNA-directed RNA polymerase III su...1180.0000001     61.2     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
42Q7T6X5    1495   RPO1_MIMIV DNA-directed RNA polymerase subuni...680.0001     50.8     38     50GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
43Q196X0    1377   RPB1_IIV3 Probable DNA-directed RNA polymeras...1210.0000002     60.1     32     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
44P0C989    1450   RPB1_ASFK5 Probable DNA-directed RNA polymera...980.00001     53.9     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
45P0C987    1450   RPB1_ASFP4 Probable DNA-directed RNA polymera...980.00001     54.3     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
46P0C988    1450   RPB1_ASFWA Probable DNA-directed RNA polymera...980.00001     54.3     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
47P42486    1450   RPB1_ASFB7 Probable DNA-directed RNA polymera...980.00001     54.3     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
48Q65215    1450   RPB1_ASFM2 Probable DNA-directed RNA polymera...980.00001     54.3     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
49Q6GZW7    1293   RPB1_FRG3G Putative DNA-directed RNA polymera...1610.12     40.8     27     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
50Q58445    1341   RPOA1_METJA DNA-directed RNA polymerase subun...1000.0000000000004     79     40     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
51P14248    2452   RPB1_PLAFD DNA-directed RNA polymerase II sub...1560.000000000002     76.3     31     51GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
52O55766    1026   RPB1_IIV6 Probable DNA-directed RNA polymeras...1280.0000000006     68.2     32     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
53A5DCV3    1579   RPB1_PICGU DNA-directed RNA polymerase II sub...1090.000000000006     75.1     38     51GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
54P94899    989   RPOC_LEUPS DNA-directed RNA polymerase subuni...8337e-40     165     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
55A7GK13    1204   RPOC_BACCN DNA-directed RNA polymerase subuni...9505e-39     163     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
56Q1WVA4    1221   RPOC_LACS1 DNA-directed RNA polymerase subuni...8277e-39     162     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
57A8AZI2    1215   RPOC_STRGC DNA-directed RNA polymerase subuni...8262e-38     161     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
58P96178    1054   RPOC_WEIPA DNA-directed RNA polymerase subuni...8203e-38     160     24     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
59P28364    478   RPB1_EUPOC DNA-directed RNA polymerase II sub...1000.0000000000005     77     38     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
60Q73FA3    1203   RPOC_BACC1 DNA-directed RNA polymerase subuni...9615e-38     159     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
61A9WSX9    1299   RPOC_RENSM DNA-directed RNA polymerase subuni...8425e-38     159     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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