Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR340C
Length:
326
Number of sequences:
5887
Description:
YOR340C RPA43 SGDID:S000005867, Chr XV from 960182-959202, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase I subunit A43"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P46669    326   RPA43_YEAST DNA-directed RNA polymerase I sub...3260     665     100     100GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IGI:SGD.
2O43036    173   RPA43_SCHPO DNA-directed RNA polymerase I sub...1422e-24     102     37     58GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; TAS:PomBase.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; IC:PomBase.
3Q55FA4    356   RPA43_DICDI Probable DNA-directed RNA polymer...1360.0000000004     63.9     30     49GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.
GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.
4Q6PHG8    391   RPA43_DANRE DNA-directed RNA polymerase I sub...1260.000000004     60.8     29     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
5Q78WZ7    330   RPA43_MOUSE DNA-directed RNA polymerase I sub...1240.00000003     58.2     27     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
6Q3B726    338   RPA43_HUMAN DNA-directed RNA polymerase I sub...1280.00000006     57     28     49GO:0015630; C:microtubule cytoskeleton; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
7C4ZAZ2    323   PRMA_EUBR3 Ribosomal protein L11 methyltransf...430.7     35     40     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008276; F:protein methyltransferase activity; IEA:InterPro.
8Q92995    863   UBP13_HUMAN Ubiquitin carboxyl-terminal hydro...652.1     33.9     32     48
GO:0004197; F:cysteine-type endopeptidase activity; TAS:ProtInc.::GO:0008242; F:omega peptidase activity; IEA:InterPro.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.::GO:0004843; F:ubiquitin-specific protease activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
9E1BMF7    863   UBP13_BOVIN Ubiquitin carboxyl-terminal hydro...652.4     33.9     34     46
GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.::GO:0008242; F:omega peptidase activity; IEA:InterPro.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
10Q5BKP2    858   UBP13_MOUSE Ubiquitin carboxyl-terminal hydro...652.6     33.5     34     46
GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.::GO:0008242; F:omega peptidase activity; IEA:InterPro.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
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