rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
211 | Q08E07 | 461 | CELF3_BOVIN CUGBP Elav-like family member 3 O... | 187 | 0.0003 | 44.7 | 24 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 212 | Q6DJI9 | 218 | ZCRB1_XENLA Zinc finger CCHC-type and RNA-bin... | 84 | 0.78 | 33.9 | 29 | 56 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 213 | Q09301 | 197 | YQOC_CAEEL Putative RNA-binding protein EEED8... | 87 | 0.0004 | 43.5 | 29 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 214 | O81126 | 200 | RZP22_ARATH Serine/arginine-rich splicing fac... | 64 | 0.0004 | 43.5 | 36 | 61 | GO:0016607; C:nuclear speck; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:TAIR. | 215 | Q8CIN6 | 465 | CELF3_MOUSE CUGBP Elav-like family member 3 O... | 187 | 0.0005 | 43.9 | 24 | 44 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0030317; P:sperm motility; IMP:MGI.::GO:0007283; P:spermatogenesis; IMP:MGI. | 216 | Q3SZM1 | 296 | MK67I_BOVIN MKI67 FHA domain-interacting nucl... | 73 | 0.0005 | 43.5 | 32 | 55 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 217 | Q6K9C3 | 200 | RZP23_ORYSJ Serine/arginine-rich splicing fac... | 62 | 0.0006 | 43.1 | 37 | 65 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 218 | A0JM51 | 486 | CELF5_XENTR CUGBP Elav-like family member 5 O... | 109 | 0.29 | 35.4 | 25 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 219 | Q3ZC12 | 320 | EIF3G_BOVIN Eukaryotic translation initiation... | 80 | 0.0006 | 43.5 | 35 | 48 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 220 | Q7ZWE3 | 555 | LARP7_DANRE La-related protein 7 OS=Danio rer... | 65 | 0.0006 | 43.9 | 34 | 55 | GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 221 | Q44554 | 103 | RBPB_NOSS1 Putative RNA-binding protein rbpB ... | 64 | 0.0006 | 41.2 | 27 | 55 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 222 | Q62504 | 3644 | MINT_MOUSE Msx2-interacting protein OS=Mus mu... | 178 | 0.0006 | 43.9 | 21 | 42 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0003697; F:single-stranded DNA binding; IDA:MGI.::GO:0003714; F:transcription corepressor activity; IDA:MGI. | | | | | | | | | | GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.::GO:0007219; P:Notch signaling pathway; IEA:UniProtKB-KW.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 223 | B0BNE4 | 269 | EPAB2_RAT Embryonic polyadenylate-binding pro... | 82 | 0.0006 | 43.1 | 34 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 224 | O75821 | 320 | EIF3G_HUMAN Eukaryotic translation initiation... | 80 | 0.0007 | 43.5 | 35 | 48 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 225 | Q9WX39 | 105 | RBPF_NOSS1 Putative RNA-binding protein rbpF ... | 64 | 0.0007 | 41.2 | 27 | 55 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 226 | A4QNI8 | 400 | ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tr... | 61 | 1.2 | 33.5 | 30 | 56 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 227 | Q9Z1D1 | 320 | EIF3G_MOUSE Eukaryotic translation initiation... | 80 | 0.0007 | 43.1 | 35 | 48 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 228 | O14327 | 166 | PAB2_SCHPO Polyadenylate-binding protein 2 OS... | 89 | 0.0007 | 42.4 | 31 | 52 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:PomBase. | 229 | Q5RK09 | 320 | EIF3G_RAT Eukaryotic translation initiation f... | 80 | 0.0007 | 43.1 | 35 | 48 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 230 | Q7SZT7 | 400 | ELAV4_XENLA ELAV-like protein 4 OS=Xenopus la... | 61 | 1.2 | 33.5 | 30 | 56 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 231 | Q9SJA6 | 196 | RZ22A_ARATH Serine/arginine-rich splicing fac... | 64 | 0.0008 | 42.7 | 36 | 61 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008380; P:RNA splicing; NAS:TAIR. | 232 | P26369 | 475 | U2AF2_MOUSE Splicing factor U2AF 65 kDa subun... | 105 | 0.96 | 33.9 | 26 | 47 | GO:0016607; C:nuclear speck; TAS:UniProtKB. | | | | | | | | | | GO:0070742; F:C2H2 zinc finger domain binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IDA:UniProtKB. | 233 | Q24562 | 416 | U2AF2_DROME Splicing factor U2AF 50 kDa subun... | 194 | 0.001 | 43.1 | 25 | 45 | GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; TAS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008187; F:poly-pyrimidine tract binding; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0051168; P:nuclear export; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 234 | P26368 | 475 | U2AF2_HUMAN Splicing factor U2AF 65 kDa subun... | 103 | 3.3 | 32.3 | 23 | 46 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 235 | Q15415 | 496 | RBY1F_HUMAN RNA-binding motif protein, Y chro... | 117 | 0.001 | 43.1 | 28 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; NAS:UniProtKB. | 236 | P82277 | 260 | RRP2_SPIOL 30S ribosomal protein 2, chloropla... | 186 | 0.001 | 42.7 | 24 | 46 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 237 | Q8VXZ9 | 425 | R47BP_ARATH Polyadenylate-binding protein RBP... | 64 | 0.34 | 35 | 25 | 53 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 238 | O81127 | 187 | RZP21_ARATH Serine/arginine-rich splicing fac... | 62 | 0.001 | 42 | 40 | 60 | GO:0016607; C:nuclear speck; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:TAIR. | 239 | Q5BGA9 | 819 | MRD1_EMENI Multiple RNA-binding domain-contai... | 196 | 0.001 | 43.1 | 22 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 240 | Q96T58 | 3664 | MINT_HUMAN Msx2-interacting protein OS=Homo s... | 178 | 0.001 | 43.1 | 21 | 42 | GO:0017053; C:transcriptional repressor complex; IDA:BHF-UCL. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0001085; F:RNA polymerase II transcription factor binding; IPI:BHF-UCL.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:BHF-UCL. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0007219; P:Notch signaling pathway; IEA:UniProtKB-KW.::GO:0050769; P:positive regulation of neurogenesis; IMP:BHF-UCL. | 241 | Q09100 | 369 | RNP24_SCHPO RNA-binding protein rnp24 OS=Schi... | 77 | 0.48 | 34.7 | 26 | 52 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase. |