Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR310C
Length:
511
Number of sequences:
5887
Description:
YOR310C NOP58 SGDID:S000005837, Chr XV from 898360-896825, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q4R779    530   NOP58_MACFA Nucleolar protein 58 OS=Macaca fa...4613e-143     429     49     68GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
32Q6DFW4    536   NOP58_MOUSE Nucleolar protein 58 OS=Mus muscu...4355e-142     426     51     71GO:0005730; C:nucleolus; IC:MGI.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
33O04658    533   NOP5A_ARATH Probable nucleolar protein 5-1 OS...4441e-141     425     50     67GO:0005730; C:nucleolus; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
34Q9QZ86    534   NOP58_RAT Nucleolar protein 58 OS=Rattus norv...4352e-141     424     51     70GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; IDA:RGD.
GO:0008649; F:rRNA methyltransferase activity; NAS:RGD.::GO:0030519; F:snoRNP binding; TAS:UniProtKB.::GO:0051082; F:unfolded protein binding; TAS:UniProtKB.
GO:0006608; P:snRNP protein import into nucleus; IDA:UniProtKB.
35Q55FI4    638   NOP58_DICDI Nucleolar protein 58 OS=Dictyoste...4591e-127     393     49     66GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
36O04656    450   NOP5C_ARATH Putative nucleolar protein 5-3 OS...4758e-107     333     44     60GO:0016020; C:membrane; IDA:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
37O94514    497   NOP56_SCHPO Nucleolar protein 56 OS=Schizosac...4572e-103     325     41     61GO:0005730; C:nucleolus; IDA:PomBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
38Q12460    504   NOP56_YEAST Nucleolar protein 56 OS=Saccharom...4142e-102     323     43     63GO:0030686; C:90S preribosome; IDA:SGD.::GO:0031428; C:box C/D snoRNP complex; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0000154; P:rRNA modification; TAS:SGD.
39O00567    594   NOP56_HUMAN Nucleolar protein 56 OS=Homo sapi...4391e-100     321     42     62GO:0031428; C:box C/D snoRNP complex; NAS:BHF-UCL.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0070761; C:pre-snoRNP complex; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0030515; F:snoRNA binding; IDA:BHF-UCL.
GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; TAS:ProtInc.
40Q5RA29    594   NOP56_PONAB Nucleolar protein 56 OS=Pongo abe...4395e-100     320     42     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
41Q95K50    594   NOP56_MACFA Nucleolar protein 56 OS=Macaca fa...4371e-98     316     42     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
42Q9D6Z1    580   NOP56_MOUSE Nucleolar protein 56 OS=Mus muscu...4121e-98     315     42     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
43Q3SZ63    596   NOP56_BOVIN Nucleolar protein 56 OS=Bos tauru...4373e-98     315     42     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
44Q21276    486   YZVL_CAEEL Uncharacterized NOP5 family protei...4338e-94     300     40     61
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.
45Q54MT2    540   NOP56_DICDI Nucleolar protein 56 OS=Dictyoste...4371e-86     283     39     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase.
GO:0006364; P:rRNA processing; ISS:dictyBase.
46Q58105    414   Y694_METJA Uncharacterized NOP5 family protei...2276e-48     176     42     60
GO:0005515; F:protein binding; IPI:IntAct.
47Q7SXM7    508   PRP31_DANRE U4/U6 small nuclear ribonucleopro...2656e-23     105     26     48GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:ZFIN.::GO:0060041; P:retina development in camera-type eye; IMP:ZFIN.
48Q5U5C5    498   PRP31_XENLA U4/U6 small nuclear ribonucleopro...2407e-23     105     27     51GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
49Q8CCF0    499   PRP31_MOUSE U4/U6 small nuclear ribonucleopro...2407e-23     105     27     51GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
50Q6NVP6    498   PRP31_XENTR U4/U6 small nuclear ribonucleopro...2402e-22     103     26     50GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
51O42904    518   PRP31_SCHPO Pre-mRNA-processing factor 31 OS=...2403e-21     100     27     50GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000244; P:assembly of spliceosomal tri-snRNP; ISS:PomBase.::GO:0007126; P:meiosis; NAS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
52Q8WWY3    499   PRP31_HUMAN U4/U6 small nuclear ribonucleopro...2401e-20     98.6     27     52GO:0015030; C:Cajal body; IDA:MGI.::GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:MGI.::GO:0005684; C:U2-type spliceosomal complex; IC:BHF-UCL.::GO:0005687; C:U4 snRNP; IDA:BHF-UCL.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:MGI.::GO:0005690; C:U4atac snRNP; TAS:BHF-UCL.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0070990; F:snRNP binding; IPI:BHF-UCL.
GO:0000244; P:assembly of spliceosomal tri-snRNP; IMP:BHF-UCL.
53P49704    494   PRP31_YEAST Pre-mRNA-processing factor 31 OS=...2100.00000000006     68.2     24     50GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000387; P:spliceosomal snRNP assembly; IDA:SGD.
54Q4G0P3    5121   HYDIN_HUMAN Hydrocephalus-inducing protein ho...952.3     35     25     51
55Q80W93    5154   HYDIN_MOUSE Hydrocephalus-inducing protein OS...980.033     40.8     28     51
GO:0042384; P:cilium assembly; IMP:MGI.::GO:0003341; P:cilium movement; IMP:MGI.::GO:0002064; P:epithelial cell development; IMP:MGI.::GO:0060438; P:trachea development; IMP:MGI.::GO:0021591; P:ventricular system development; IMP:MGI.
56A7M9B2    1750   YCF1_CUSRE Putative membrane protein ycf1 OS=...862.4     34.7     22     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0042170; C:plastid membrane; IEA:UniProtKB-SubCell.
57Q8JHV6    1827   LAMB4_DANRE Laminin subunit beta-4 OS=Danio r...3320.1     39.3     22     41GO:0005604; C:basement membrane; IEA:UniProtKB-SubCell.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
58A2R7P5    1201   NST1_ASPNC Stress response protein nst1 OS=As...630.17     38.5     25     83GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
59P45481    2441   CBP_MOUSE CREB-binding protein OS=Mus musculu...1050.17     38.5     27     42GO:0000940; C:condensed chromosome outer kinetochore; IDA:MGI.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000123; C:histone acetyltransferase complex; IDA:MGI.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0043426; F:MRF binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030718; P:germ-line stem cell maintenance; IMP:MGI.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; TAS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
60P26358    1616   DNMT1_HUMAN DNA (cytosine-5)-methyltransferas...1270.29     37.7     22     49GO:0005634; C:nucleus; TAS:ProtInc.
GO:0003886; F:DNA (cytosine-5-)-methyltransferase activity; TAS:ProtInc.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010216; P:maintenance of DNA methylation; IDA:UniProtKB.::GO:0051573; P:negative regulation of histone H3-K9 methylation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0010628; P:positive regulation of gene expression; IMP:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
61Q24K09    1611   DNMT1_BOVIN DNA (cytosine-5)-methyltransferas...1102.7     34.7     20     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003886; F:DNA (cytosine-5-)-methyltransferase activity; IEA:EC.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008134; F:transcription factor binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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