Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR308C
Length:
587
Number of sequences:
5887
Description:
YOR308C SNU66 SGDID:S000005835, Chr XV from 896387-894624, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the U4/U6.U5 snRNP complex involved in pre-mRNA splicing via spliceosome; also required for pre-5S rRNA processing and may act in concert with Rnh70p; has homology to human SART-1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12420    587   SNU66_YEAST 66 kDa U4/U6.U5 small nuclear rib...5870     1188     100     100GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0000481; P:maturation of 5S rRNA; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
2O43290    800   SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated pro...2220.4     37.4     23     41GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:HPA.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007050; P:cell cycle arrest; NAS:UniProtKB.::GO:0008629; P:induction of apoptosis by intracellular signals; NAS:UniProtKB.::GO:0045585; P:positive regulation of cytotoxic T cell differentiation; IDA:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; TAS:BHF-UCL.
3Q5XIW8    806   SNUT1_RAT U4/U6.U5 tri-snRNP-associated prote...2080.69     36.6     25     43GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q9Z315    806   SNUT1_MOUSE U4/U6.U5 tri-snRNP-associated pro...2080.2     38.5     25     43
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5O94538    649   SNU66_SCHPO U4/U6.U5 tri-snRNP-associated pro...2030.0002     48.1     26     47GO:0005681; C:spliceosomal complex; IC:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000481; P:maturation of 5S rRNA; ISS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
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