Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR295W
Length:
228
Number of sequences:
5887
Description:
YOR295W UAF30 SGDID:S000005821, Chr XV from 869208-869894, Genome Release 64-1-1, Verified ORF, "Subunit of UAF (upstream activation factor), which is an RNA polymerase I specific transcription stimulatory factor composed of Uaf30p, Rrn5p, Rrn9p, Rrn10p, histones H3 and H4; deletion decreases cellular growth rate"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08747    228   UAF30_YEAST Upstream activation factor subuni...2281e-163     458     100     100GO:0000500; C:RNA polymerase I upstream activating factor complex; IDA:SGD.
GO:0001165; F:RNA polymerase I upstream control element sequence-specific DNA binding; IDA:SGD.
GO:0006325; P:chromatin organization; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD.
2Q05024    226   TRI1_YEAST Protein TRI1 OS=Saccharomyces cere...1991e-40     144     41     62GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3O74503    233   UAF30_SCHPO Upstream activation factor subuni...2042e-23     98.6     35     54GO:0005829; C:cytosol; IDA:PomBase.::GO:0000500; C:RNA polymerase I upstream activating factor complex; TAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006360; P:transcription from RNA polymerase I promoter; TAS:PomBase.
4Q61466    515   SMRD1_MOUSE SWI/SNF-related matrix-associated...780.0000001     55.1     36     56GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
5Q96GM5    515   SMRD1_HUMAN SWI/SNF-related matrix-associated...780.0000003     53.9     35     56GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0032947; F:protein complex scaffold; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.
GO:0048096; P:chromatin-mediated maintenance of transcription; IMP:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.
6Q2TBN1    515   SMRD1_BOVIN SWI/SNF-related matrix-associated...780.0000003     53.9     35     56GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
7Q9FMT4    534   SNF12_ARATH SWI/SNF complex component SNF12 h...780.0000007     52.8     33     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9P7S3    425   SSR3_SCHPO SWI/SNF and RSC complexes subunit ...740.000009     49.3     36     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.
9Q9SIV5    1773   C3H19_ARATH Zinc finger CCCH domain-containin...520.00002     48.5     44     63
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
10Q9SD34    1292   C3H44_ARATH Zinc finger CCCH domain-containin...560.002     42.7     41     61GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016570; P:histone modification; IEA:InterPro.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
11Q6P9Z1    483   SMRD3_MOUSE SWI/SNF-related matrix-associated...540.002     42.4     35     59GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB.
GO:0003219; P:cardiac right ventricle formation; IMP:MGI.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042692; P:muscle cell differentiation; IMP:MGI.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0043393; P:regulation of protein binding; IDA:MGI.::GO:0003139; P:secondary heart field specification; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q6STE5    483   SMRD3_HUMAN SWI/SNF-related matrix-associated...540.002     42.4     35     59GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0016514; C:SWI/SNF complex; NAS:UniProtKB.
GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:BHF-UCL.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IMP:BHF-UCL.::GO:0035257; F:nuclear hormone receptor binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0002052; P:positive regulation of neuroblast proliferation; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB.
13Q92925    531   SMRD2_HUMAN SWI/SNF-related matrix-associated...750.002     42.4     33     48GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0003713; F:transcription coactivator activity; NAS:UniProtKB.
GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14E1BJD1    531   SMRD2_BOVIN SWI/SNF-related matrix-associated...750.002     42.4     33     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q99JR8    531   SMRD2_MOUSE SWI/SNF-related matrix-associated...750.003     42     33     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16O54772    531   SMRD2_RAT SWI/SNF-related matrix-associated a...750.003     42     33     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17Q9FT92    553   Y5843_ARATH Uncharacterized protein At5g08430...860.01     40     31     55GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0016570; P:histone modification; IEA:InterPro.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
18Q556Z0    456   SNF12_DICDI SWI/SNF complex component SNF12 h...760.033     38.5     32     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q196Z0    282   VF306_IIV3 Putative SWIB domain-containing pr...550.3     35.4     36     65
20Q4P9K9    2005   CHS8_USTMA Chitin synthase 8 OS=Ustilago mayd...530.96     34.3     36     58GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0016459; C:myosin complex; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004100; F:chitin synthase activity; IEA:EC.::GO:0020037; F:heme binding; IEA:InterPro.::GO:0003774; F:motor activity; IEA:InterPro.
GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.
21P0A2B9    155   RNH_SALTY Ribonuclease HI OS=Salmonella typhi...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
22P0A2C0    155   RNH_SALTI Ribonuclease HI OS=Salmonella typhi...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
23B4TYH0    155   RNH_SALSV Ribonuclease H OS=Salmonella schwar...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
24B5BDW5    155   RNH_SALPK Ribonuclease H OS=Salmonella paraty...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
25C0Q6N2    155   RNH_SALPC Ribonuclease H OS=Salmonella paraty...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
26A9MZ19    155   RNH_SALPB Ribonuclease H OS=Salmonella paraty...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
27Q5PFD8    155   RNH_SALPA Ribonuclease H OS=Salmonella paraty...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
28B4SV39    155   RNH_SALNS Ribonuclease H OS=Salmonella newpor...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
29B4TK85    155   RNH_SALHS Ribonuclease H OS=Salmonella heidel...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
30B5R5L3    155   RNH_SALG2 Ribonuclease H OS=Salmonella gallin...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
31B5R449    155   RNH_SALEP Ribonuclease H OS=Salmonella enteri...1001.3     32.7     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
records
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