rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q08747 | 228 | UAF30_YEAST Upstream activation factor subuni... | 228 | 1e-163 | 458 | 100 | 100 | GO:0000500; C:RNA polymerase I upstream activating factor complex; IDA:SGD. | | | | | | | | | | GO:0001165; F:RNA polymerase I upstream control element sequence-specific DNA binding; IDA:SGD. | | | | | | | | | | GO:0006325; P:chromatin organization; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD. | 2 | Q05024 | 226 | TRI1_YEAST Protein TRI1 OS=Saccharomyces cere... | 199 | 1e-40 | 144 | 41 | 62 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | O74503 | 233 | UAF30_SCHPO Upstream activation factor subuni... | 204 | 2e-23 | 98.6 | 35 | 54 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0000500; C:RNA polymerase I upstream activating factor complex; TAS:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006360; P:transcription from RNA polymerase I promoter; TAS:PomBase. | 4 | Q61466 | 515 | SMRD1_MOUSE SWI/SNF-related matrix-associated... | 78 | 0.0000001 | 55.1 | 36 | 56 | GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 5 | Q96GM5 | 515 | SMRD1_HUMAN SWI/SNF-related matrix-associated... | 78 | 0.0000003 | 53.9 | 35 | 56 | GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB. | | | | | | | | | | GO:0032947; F:protein complex scaffold; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL. | | | | | | | | | | GO:0048096; P:chromatin-mediated maintenance of transcription; IMP:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL. | 6 | Q2TBN1 | 515 | SMRD1_BOVIN SWI/SNF-related matrix-associated... | 78 | 0.0000003 | 53.9 | 35 | 56 | GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 7 | Q9FMT4 | 534 | SNF12_ARATH SWI/SNF complex component SNF12 h... | 78 | 0.0000007 | 52.8 | 33 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 8 | Q9P7S3 | 425 | SSR3_SCHPO SWI/SNF and RSC complexes subunit ... | 74 | 0.000009 | 49.3 | 36 | 51 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase. | | | | | | | | | | GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase. | 9 | Q9SIV5 | 1773 | C3H19_ARATH Zinc finger CCCH domain-containin... | 52 | 0.00002 | 48.5 | 44 | 63 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 10 | Q9SD34 | 1292 | C3H44_ARATH Zinc finger CCCH domain-containin... | 56 | 0.002 | 42.7 | 41 | 61 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016570; P:histone modification; IEA:InterPro.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro. | 11 | Q6P9Z1 | 483 | SMRD3_MOUSE SWI/SNF-related matrix-associated... | 54 | 0.002 | 42.4 | 35 | 59 | GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0003219; P:cardiac right ventricle formation; IMP:MGI.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042692; P:muscle cell differentiation; IMP:MGI.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0043393; P:regulation of protein binding; IDA:MGI.::GO:0003139; P:secondary heart field specification; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 12 | Q6STE5 | 483 | SMRD3_HUMAN SWI/SNF-related matrix-associated... | 54 | 0.002 | 42.4 | 35 | 59 | GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0016514; C:SWI/SNF complex; NAS:UniProtKB. | | | | | | | | | | GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:BHF-UCL.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IMP:BHF-UCL.::GO:0035257; F:nuclear hormone receptor binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0002052; P:positive regulation of neuroblast proliferation; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB. | 13 | Q92925 | 531 | SMRD2_HUMAN SWI/SNF-related matrix-associated... | 75 | 0.002 | 42.4 | 33 | 48 | GO:0016514; C:SWI/SNF complex; IDA:UniProtKB. | | | | | | | | | | GO:0003713; F:transcription coactivator activity; NAS:UniProtKB. | | | | | | | | | | GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 14 | E1BJD1 | 531 | SMRD2_BOVIN SWI/SNF-related matrix-associated... | 75 | 0.002 | 42.4 | 33 | 48 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 15 | Q99JR8 | 531 | SMRD2_MOUSE SWI/SNF-related matrix-associated... | 75 | 0.003 | 42 | 33 | 48 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 16 | O54772 | 531 | SMRD2_RAT SWI/SNF-related matrix-associated a... | 75 | 0.003 | 42 | 33 | 48 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 17 | Q9FT92 | 553 | Y5843_ARATH Uncharacterized protein At5g08430... | 86 | 0.01 | 40 | 31 | 55 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0016570; P:histone modification; IEA:InterPro.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro. | 18 | Q556Z0 | 456 | SNF12_DICDI SWI/SNF complex component SNF12 h... | 76 | 0.033 | 38.5 | 32 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 19 | Q196Z0 | 282 | VF306_IIV3 Putative SWIB domain-containing pr... | 55 | 0.3 | 35.4 | 36 | 65 | | | | | | | | | | | | | | | | | | | | | | 20 | Q4P9K9 | 2005 | CHS8_USTMA Chitin synthase 8 OS=Ustilago mayd... | 53 | 0.96 | 34.3 | 36 | 58 | GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0016459; C:myosin complex; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004100; F:chitin synthase activity; IEA:EC.::GO:0020037; F:heme binding; IEA:InterPro.::GO:0003774; F:motor activity; IEA:InterPro. | | | | | | | | | | GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW. | 21 | P0A2B9 | 155 | RNH_SALTY Ribonuclease HI OS=Salmonella typhi... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 22 | P0A2C0 | 155 | RNH_SALTI Ribonuclease HI OS=Salmonella typhi... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 23 | B4TYH0 | 155 | RNH_SALSV Ribonuclease H OS=Salmonella schwar... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 24 | B5BDW5 | 155 | RNH_SALPK Ribonuclease H OS=Salmonella paraty... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 25 | C0Q6N2 | 155 | RNH_SALPC Ribonuclease H OS=Salmonella paraty... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 26 | A9MZ19 | 155 | RNH_SALPB Ribonuclease H OS=Salmonella paraty... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 27 | Q5PFD8 | 155 | RNH_SALPA Ribonuclease H OS=Salmonella paraty... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 28 | B4SV39 | 155 | RNH_SALNS Ribonuclease H OS=Salmonella newpor... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 29 | B4TK85 | 155 | RNH_SALHS Ribonuclease H OS=Salmonella heidel... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 30 | B5R5L3 | 155 | RNH_SALG2 Ribonuclease H OS=Salmonella gallin... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | | 31 | B5R449 | 155 | RNH_SALEP Ribonuclease H OS=Salmonella enteri... | 100 | 1.3 | 32.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | |