Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR290C
Length:
1703
Number of sequences:
5887
Description:
YOR290C SNF2 SGDID:S000005816, Chr XV from 860258-855147, Genome Release 64-1-1, reverse complement, Verified ORF, "Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511A9L3Y2    968   RAPA_SHEB9 RNA polymerase-associated protein ...714     35.8     28     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
512B8ECC6    968   RAPA_SHEB2 RNA polymerase-associated protein ...714     35.8     28     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
513B0URM0    966   RAPA_HAES2 RNA polymerase-associated protein ...1824.1     35.8     23     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
514A4YAN1    968   RAPA_SHEPC RNA polymerase-associated protein ...714.2     35.8     28     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
515A3LQW7    530   DBP2_PICST ATP-dependent RNA helicase DBP2 OS...1204.2     35.8     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
516A5VZN0    948   RAPA_PSEP1 RNA polymerase-associated protein ...1834.2     35.8     23     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
517Q54KX4    177   LSM4_DICDI Probable U6 snRNA-associated Sm-li...334.3     34.7     52     61GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:dictyBase.::GO:0005688; C:U6 snRNP; ISS:dictyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; ISS:dictyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
518Q6FQZ0    437   DBP8_CANGA ATP-dependent RNA helicase DBP8 OS...1144.4     35.4     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
519A6WSX5    968   RAPA_SHEB8 RNA polymerase-associated protein ...494.4     35.8     37     55
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
520P40562    993   MPH1_YEAST ATP-dependent DNA helicase MPH1 OS...664.5     35.8     32     56GO:0005634; C:nucleus; IDA:SGD.
GO:0043138; F:3'-5' DNA helicase activity; IDA:SGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0070336; F:flap-structured DNA binding; IDA:SGD.
GO:0033567; P:DNA replication, Okazaki fragment processing; IGI:SGD.::GO:0060543; P:negative regulation of strand invasion; IMP:SGD.::GO:0000725; P:recombinational repair; IMP:SGD.
521A6ZVS0    993   MPH1_YEAS7 ATP-dependent DNA helicase MPH1 OS...664.6     35.8     32     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
522Q4IJM4    340   CSN5_GIBZE COP9 signalosome complex subunit 5...1074.6     35.4     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
523Q51647    107   YISX_BURM1 Insertion element IS401 uncharacte...574.7     33.1     32     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004803; F:transposase activity; IEA:InterPro.
GO:0006313; P:transposition, DNA-mediated; IEA:InterPro.
524P0CQ76    540   DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A ...1074.7     35.4     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
525P0CQ77    540   DBP2_CRYNB ATP-dependent RNA helicase DBP2-A ...1074.7     35.4     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
526Q7Y214    590   GTE7_ARATH Transcription factor GTE7 OS=Arabi...524.8     35.4     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
527Q966L9    974   GLH2_CAEEL ATP-dependent RNA helicase glh-2 O...1024.8     35.8     25     41GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0043621; F:protein self-association; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0009791; P:post-embryonic development; IMP:WormBase.
528Q1DP69    542   DBP2_COCIM ATP-dependent RNA helicase DBP2 OS...2325     35.4     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
529A6VQU2    966   RAPA_ACTSZ RNA polymerase-associated protein ...805.2     35.4     28     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
530Q9ULI0    1458   ATD2B_HUMAN ATPase family AAA domain-containi...855.6     35.4     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
531Q6FPQ3    1052   MPH1_CANGA ATP-dependent DNA helicase MPH1 OS...565.7     35.4     30     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
532Q07XC8    968   RAPA_SHEFN RNA polymerase-associated protein ...496.6     35     37     55
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
533Q5UQU2    817   YR350_MIMIV Putative ATP-dependent RNA helica...1807.1     35     26     40GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
534Q6GZW6    948   009L_FRG3G Putative helicase 009L OS=Frog vir...617.4     35     33     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
535Q8KC79    684   UVRB_CHLTE UvrABC system protein B OS=Chlorob...2537.6     35     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
536Q0HR19    968   RAPA_SHESR RNA polymerase-associated protein ...1048.5     35     27     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
537Q5UQ98    445   YL538_MIMIV Putative ATP-dependent RNA helica...4549.1     34.7     21     39GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
538P24782    550   DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS...1049.2     34.7     27     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0005524; F:ATP binding; ISS:PomBase.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.
539Q9ATY5    1479   UVH3_ARATH DNA repair protein UVH3 OS=Arabido...469.2     34.7     41     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:TAIR.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0010213; P:non-photoreactive DNA repair; IMP:TAIR.::GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009408; P:response to heat; IMP:TAIR.::GO:0010224; P:response to UV-B; IGI:TAIR.
540Q2U070    554   DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS...1259.2     34.7     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
541P0C2N8    829   DRS1_NEUCR ATP-dependent RNA helicase drs-1 O...999.7     34.7     24     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
records
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