Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR290C
Length:
1703
Number of sequences:
5887
Description:
YOR290C SNF2 SGDID:S000005816, Chr XV from 860258-855147, Genome Release 64-1-1, reverse complement, Verified ORF, "Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361P35177    1332   SPT7_YEAST Transcriptional activator SPT7 OS=...600.13     40.8     33     58GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0000747; P:conjugation with cellular fusion; IMP:SGD.::GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006461; P:protein complex assembly; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
362Q8K363    660   DDX18_MOUSE ATP-dependent RNA helicase DDX18 ...1660.14     40.4     23     43GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
363Q3ATT8    681   UVRB_CHLCH UvrABC system protein B OS=Chlorob...1870.14     40.4     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
364B5FGE9    969   RAPA_VIBFM RNA polymerase-associated protein ...1506.3     35.4     25     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
365A4TQB3    968   RAPA_YERPP RNA polymerase-associated protein ...901.1     37.7     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
366Q1CMQ6    968   RAPA_YERPN RNA polymerase-associated protein ...901.1     37.7     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
367A9R154    968   RAPA_YERPG RNA polymerase-associated protein ...901.1     37.7     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
368Q8ZII0    968   RAPA_YERPE RNA polymerase-associated protein ...901.1     37.7     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
369Q1C1Y2    968   RAPA_YERPA RNA polymerase-associated protein ...901.1     37.7     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
370Q9S7T1    461   GTE3_ARATH Transcription factor GTE3, chlorop...520.16     40     38     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0042393; F:histone binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
371Q5E881    952   RAPA_VIBF1 RNA polymerase-associated protein ...498.7     34.7     35     55
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
372Q59PR3    440   DBP8_CANAL ATP-dependent RNA helicase DBP8 OS...1270.17     40     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
373P35817    686   BDF1_YEAST Bromodomain-containing factor 1 OS...1590.17     40.4     23     41GO:0000812; C:Swr1 complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0001047; F:core promoter binding; IDA:SGD.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0001094; F:TFIID-class transcription factor binding; IDA:SGD.
GO:0006338; P:chromatin remodeling; IPI:SGD.::GO:0006281; P:DNA repair; IMP:SGD.::GO:0031452; P:negative regulation of heterochromatin assembly; IMP:SGD.::GO:1900051; P:positive regulation of histone exchange; IMP:SGD.::GO:0090054; P:regulation of chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0009301; P:snRNA transcription; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
374Q4WXW1    526   DBP8_ASPFU ATP-dependent RNA helicase dbp8 OS...3130.18     40     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
375Q9BXF3    1484   CECR2_HUMAN Cat eye syndrome critical region ...750.19     40.4     29     48
GO:0005515; F:protein binding; IPI:HGNC.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000910; P:cytokinesis; NAS:UniProtKB.::GO:0007010; P:cytoskeleton organization; NAS:UniProtKB.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; TAS:HGNC.::GO:0016192; P:vesicle-mediated transport; NAS:UniProtKB.
376Q09916    578   HAS1_SCHPO ATP-dependent RNA helicase has1 OS...1150.2     40     26     41GO:0005730; C:nucleolus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
377Q9HGP4    727   YK82_SCHPO Bromodomain-containing protein C63...580.55     38.5     34     50GO:0005634; C:nucleus; IDA:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.
378B6EPV7    969   RAPA_ALISL RNA polymerase-associated protein ...1760.2     40     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
379A1BI09    685   UVRB_CHLPD UvrABC system protein B OS=Chlorob...1970.21     40     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
380Q9VHP0    798   DDX3_DROME ATP-dependent RNA helicase bel OS=...1100.23     40     29     44GO:0005811; C:lipid particle; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0043025; C:neuronal cell body; IDA:FlyBase.::GO:0043186; C:P granule; IDA:UniProtKB.::GO:0016442; C:RNA-induced silencing complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IMP:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0002168; P:instar larval development; IMP:FlyBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0016246; P:RNA interference; IMP:UniProtKB.::GO:0007286; P:spermatid development; IMP:FlyBase.
381P55201    1214   BRPF1_HUMAN Peregrin OS=Homo sapiens (Human)....590.23     40     32     54GO:0005737; C:cytoplasm; IDA:HPA.::GO:0070776; C:MOZ/MORF histone acetyltransferase complex; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
382A3LNR6    567   HAS1_PICST ATP-dependent RNA helicase HAS1 OS...1160.24     39.7     25     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
383Q56X76    621   RH39_ARATH DEAD-box ATP-dependent RNA helicas...1300.26     39.7     27     45GO:0009507; C:chloroplast; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0070180; F:LSU rRNA binding; IDA:TAIR.
GO:0080158; P:chloroplast ribulose bisphosphate carboxylase complex biogenesis; IMP:TAIR.
384Q87XS2    948   RAPA_PSESM RNA polymerase-associated protein ...1800.27     39.7     25     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
385Q6E2N3    1163   TRI33_DANRE E3 ubiquitin-protein ligase TRIM3...620.28     39.7     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
386Q9HYT6    950   RAPA_PSEAE RNA polymerase-associated protein ...1800.28     39.7     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
387B7V6T4    950   RAPA_PSEA8 RNA polymerase-associated protein ...1800.28     39.7     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
388Q54S03    602   DDX18_DICDI Probable ATP-dependent RNA helica...1090.29     39.7     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
389A1JJG0    968   RAPA_YERE8 RNA polymerase-associated protein ...1762.2     36.6     23     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
390B2VGQ6    968   RAPA_ERWT9 RNA polymerase-associated protein ...718     35     28     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
391Q48LP5    948   RAPA_PSE14 RNA polymerase-associated protein ...1800.31     39.7     25     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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