Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR287C
Length:
300
Number of sequences:
5887
Description:
YOR287C RRP36 SGDID:S000005813, Chr XV from 851839-850937, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of 90S preribosomes; involved in early cleavages of the 35S pre-rRNA and in production of the 40S ribosomal subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61A6QNR1    246   RRP36_BOVIN Ribosomal RNA processing protein ...1720.000000003     60.1     31     57GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042274; P:ribosomal small subunit biogenesis; ISS:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.
62Q96EU6    259   RRP36_HUMAN Ribosomal RNA processing protein ...1710.000000007     58.9     32     57GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0042274; P:ribosomal small subunit biogenesis; IDA:UniProtKB.::GO:0006364; P:rRNA processing; IDA:UniProtKB.
63Q54XT8    298   RRP36_DICDI Ribosomal RNA processing protein ...1760.00000006     56.6     30     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
64Q3UFY0    244   RRP36_MOUSE Ribosomal RNA processing protein ...1720.0000001     55.1     30     56GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042274; P:ribosomal small subunit biogenesis; ISS:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.
65B0CPQ8    314   RRP36_LACBS rRNA biogenesis protein RRP36 OS=...2640.0000002     55.5     27     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
66A7SL20    247   RRP36_NEMVE Ribosomal RNA processing protein ...1840.000002     51.6     29     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
67Q9P6P2    265   RRP36_SCHPO rRNA biogenesis protein rrp36 OS=...1830.00001     49.7     29     52GO:0030686; C:90S preribosome; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0000469; P:cleavage involved in rRNA processing; ISS:PomBase.::GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.
68A8N142    347   RRP36_COPC7 rRNA biogenesis protein RRP36 OS=...2190.00002     48.9     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
69P0CR20    296   RRP36_CRYNJ rRNA biogenesis protein RRP36 OS=...1690.0001     46.6     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
70P0CR21    296   RRP36_CRYNB rRNA biogenesis protein RRP36 OS=...1690.0001     46.6     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
71Q7TME2    1165   SPAG5_MOUSE Sperm-associated antigen 5 OS=Mus...860.36     36.2     35     56GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0035371; C:microtubule plus end; ISS:UniProtKB.::GO:0072686; C:mitotic spindle; ISS:UniProtKB.::GO:0005876; C:spindle microtubule; IDA:MGI.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000090; P:mitotic anaphase; ISS:UniProtKB.::GO:0000070; P:mitotic sister chromatid segregation; ISS:UniProtKB.::GO:0051988; P:regulation of attachment of spindle microtubules to kinetochore; ISS:UniProtKB.::GO:0007051; P:spindle organization; ISS:UniProtKB.
72Q8BQS5    386   ADR2_MOUSE Adiponectin receptor protein 2 OS=...492     33.5     33     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0042562; F:hormone binding; ISS:UniProtKB.::GO:0042802; F:identical protein binding; IDA:MGI.::GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0004872; F:receptor activity; IDA:MGI.
GO:0019395; P:fatty acid oxidation; ISS:UniProtKB.::GO:0009755; P:hormone-mediated signaling pathway; ISS:UniProtKB.
73P24043    3122   LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo s...862.5     33.5     33     52GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; TAS:ProtInc.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; TAS:ProtInc.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.
74Q4PI84    477   RRP36_USTMA rRNA biogenesis protein RRP36 OS=...663     33.1     35     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
75Q80VM7    985   ANR24_MOUSE Ankyrin repeat domain-containing ...1403     33.1     26     46
76P59240    1425   NPHP4_MOUSE Nephrocystin-4 OS=Mus musculus (M...784.7     32.7     29     50GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.::GO:0005923; C:tight junction; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0060041; P:retina development in camera-type eye; IMP:MGI.
77Q8IWZ3    2542   ANKH1_HUMAN Ankyrin repeat and KH domain-cont...1805.3     32.7     23     43GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78Q9PJT6    1007   Y741_CHLMU Uncharacterized protein TC_0741 OS...1575.6     32.3     27     40
79Q69ZB8    1166   ZCHC2_MOUSE Zinc finger CCHC domain-containin...2137.1     32     24     41
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007154; P:cell communication; IEA:InterPro.
80Q498S6    1168   ZCHC2_RAT Zinc finger CCHC domain-containing ...2138.6     32     23     41
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007154; P:cell communication; IEA:InterPro.
81Q8VZF3    960   CGEP_ARATH Probable glutamyl endopeptidase, c...929.3     31.6     26     49GO:0009570; C:chloroplast stroma; IDA:TAIR.
GO:0008236; F:serine-type peptidase activity; IEA:UniProtKB-KW.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 81 61 - 81
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::