Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR250C
Length:
445
Number of sequences:
5887
Description:
YOR250C CLP1 SGDID:S000005776, Chr XV from 802307-800970, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of cleavage factor I (CFI), involved in both the endonucleolyitc cleavage and polyadenylation steps of mRNA 3'-end maturation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08685    445   CLP1_YEAST Protein CLP1 OS=Saccharomyces cere...4450     920     100     100GO:0005849; C:mRNA cleavage factor complex; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
2A6ZP88    445   CLP1_YEAS7 Protein CLP1 OS=Saccharomyces cere...4450     920     100     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
3A7TH62    451   CLP1_VANPO Protein CLP1 OS=(Kluyveromyces pol...4510     529     56     74GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
4Q6FMC8    451   CLP1_CANGA Protein CLP1 OS=NRRL Y-65) (Yeast)...4472e-159     465     50     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
5Q75F23    445   CLP1_ASHGO Protein CLP1 OS=Y-1056) (Yeast) (E...4303e-148     436     51     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
6Q6CTU5    437   CLP1_KLULA Protein CLP1 OS=1267 / NRRL Y-1140...4292e-141     419     49     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
7Q6BU98    497   CLP1_DEBHA Protein CLP1 OS=0083 / IGC 2968) (...5043e-71     239     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
8A3LNJ3    453   CLP1_PICST Protein CLP1 OS=NRRL Y-11545) (Yea...4673e-70     235     35     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
9Q59ST8    489   CLP1_CANAL Protein CLP1 OS=Candida albicans (...4779e-56     198     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD.
10Q6BZT5    450   CLP1_YARLI Protein CLP1 OS=lipolytica). GN=CL...4321e-55     197     31     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
11A5DJW8    492   CLP1_PICGU Protein CLP1 OS=1539 / NBRC 10279 ...4994e-55     196     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
12A6S936    461   CLP1_BOTFB Protein clp1 OS=cinerea). GN=clp1 ...4292e-54     193     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
13Q0U2G5    468   CLP1_PHANO Protein CLP1 OS=(Glume blotch fung...4343e-52     188     29     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
14Q10299    456   CLP1_SCHPO Protein clp1 OS=Schizosaccharomyce...4712e-51     185     31     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.
15A2RAW3    477   CLP1_ASPNC Protein clp1 OS=Aspergillus niger ...4811e-49     181     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
16A4QQE0    455   CLP1_MAGO7 Protein CLP1 OS=blast fungus) (Pyr...4293e-49     179     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
17Q2H1L0    497   CLP1_CHAGB Protein CLP1 OS=6347 / NRRL 1970) ...4375e-44     166     27     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
18Q2UEA6    558   CLP1_ASPOR Protein clp1 OS=Aspergillus oryzae...5473e-42     161     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
19Q0CEZ9    556   CLP1_ASPTN Protein clp1 OS=Aspergillus terreu...5465e-42     160     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
20A5DY33    555   CLP1_LODEL Protein CLP1 OS=NBRC 1676 / NRRL Y...850.003     43.5     26     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
21Q1DKL9    582   CLP1_COCIM Protein CLP1 OS=Coccidioides immit...3753e-37     147     28     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
22A1CB93    560   CLP1_ASPCL Protein clp1 OS=3887 / NRRL 1). GN...610.0001     47.8     33     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
23Q54N48    459   CLP1_DICDI Protein CLP1 homolog OS=Dictyostel...4316e-36     142     27     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
24A1DE49    559   CLP1_NEOFI Protein clp1 OS=181) (Aspergillus ...600.00004     49.7     33     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
25Q5BH19    546   CLP1_EMENI Protein clp1 OS=194 / M139) (Asper...600.00002     50.4     38     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
26A7RG82    428   CLP1_NEMVE Protein CLP1 homolog OS=Nematostel...4454e-33     133     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
27P52874    428   CLP1_CAEEL Protein clpf-1 OS=Caenorhabditis e...4481e-32     132     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
28B4MCL6    425   CLP1_DROVI Protein CLP1 homolog OS=Drosophila...4221e-32     132     29     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
29Q7SAB7    491   CLP1_NEUCR Protein CLP1 OS=1257 / FGSC 987). ...3292e-32     132     28     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
30Q5ZJL4    425   CLP1_CHICK Polyribonucleotide 5'-hydroxyl-kin...4369e-32     129     25     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
31B0CS49    487   CLP1_LACBS Protein CLP1 OS=deceiver) (Laccari...4931e-31     129     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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