Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR250C
Length:
445
Number of sequences:
5887
Description:
YOR250C CLP1 SGDID:S000005776, Chr XV from 802307-800970, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of cleavage factor I (CFI), involved in both the endonucleolyitc cleavage and polyadenylation steps of mRNA 3'-end maturation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31B0CS49    487   CLP1_LACBS Protein CLP1 OS=deceiver) (Laccari...4931e-31     129     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
32Q4WVA5    552   CLP1_ASPFU Protein clp1 OS=A1100) (Aspergillu...600.0001     47.8     32     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
33A2VE01    425   CLP1_BOVIN Polyribonucleotide 5'-hydroxyl-kin...4361e-31     129     25     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
34B0Y0Y6    552   CLP1_ASPFC Protein clp1 OS=(Aspergillus fumig...600.0001     47.8     32     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
35Q5PQL4    425   CLP1_RAT Polyribonucleotide 5'-hydroxyl-kinas...4362e-31     128     25     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
36Q99LI9    425   CLP1_MOUSE Polyribonucleotide 5'-hydroxyl-kin...4362e-31     128     25     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
37B4HQJ2    423   CLP1_DROSE Protein CLP1 homolog OS=Drosophila...4222e-31     128     27     48GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
38Q4R7R3    425   CLP1_MACFA Polyribonucleotide 5'-hydroxyl-kin...4364e-31     127     25     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
39Q92989    425   CLP1_HUMAN Polyribonucleotide 5'-hydroxyl-kin...4364e-31     127     25     47GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000214; C:tRNA-intron endonuclease complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; TAS:UniProtKB.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; IDA:UniProtKB.
GO:0031124; P:mRNA 3'-end processing; TAS:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; IDA:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; IMP:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IDA:UniProtKB.
40B4P4H2    423   CLP1_DROYA Protein CLP1 homolog OS=Drosophila...4246e-31     127     27     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
41B4QEE3    423   CLP1_DROSI Protein CLP1 homolog OS=Drosophila...4249e-31     126     27     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
42B0VZR4    423   CLP1_CULQU Protein CLP1 homolog OS=Culex quin...4389e-31     126     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
43Q7K284    423   CLP1_DROME Protein CLP1 homolog OS=Drosophila...4241e-30     126     27     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
44Q7QJW7    423   CLP1_ANOGA Protein CLP1 homolog OS=Anopheles ...4321e-30     125     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
45B4JVN0    425   CLP1_DROGR Protein CLP1 homolog OS=Drosophila...4264e-30     124     28     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
46B4KML2    425   CLP1_DROMO Protein CLP1 homolog OS=Drosophila...4414e-30     124     27     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
47B3NRK6    423   CLP1_DROER Protein CLP1 homolog OS=Drosophila...4361e-29     123     26     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
48Q6NS21    439   CLP1_XENLA Polyribonucleotide 5'-hydroxyl-kin...4482e-29     122     24     45GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
49B4MRZ9    425   CLP1_DROWI Protein CLP1 homolog OS=Drosophila...4132e-29     122     27     45GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
50B3MGZ0    425   CLP1_DROAN Protein CLP1 homolog OS=Drosophila...4443e-29     122     27     47GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
51Q16WA6    424   CLP1_AEDAE Protein CLP1 homolog OS=Aedes aegy...4253e-29     121     26     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
52Q28ZT4    425   CLP1_DROPS Protein CLP1 homolog OS=Drosophila...4394e-29     121     26     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
53B4GGT6    425   CLP1_DROPE Protein CLP1 homolog OS=Drosophila...4394e-29     121     26     46GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
54Q66JK4    437   CLP1_XENTR Polyribonucleotide 5'-hydroxyl-kin...4294e-29     121     26     45GO:0000214; C:tRNA-intron endonuclease complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0051736; F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035087; P:siRNA loading onto RISC involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:UniProtKB.
55A8X9U4    428   CLP1_CAEBR Protein clpf-1 OS=Caenorhabditis b...4541e-27     117     23     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
56A8PB32    433   CLP1_BRUMA Protein CLP1 homolog OS=Brugia mal...4362e-27     117     26     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
57Q4P9Z3    629   CLP1_USTMA Protein CLP1 OS=Ustilago maydis (s...6172e-25     112     21     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
58A8PWG8    665   CLP1_MALGO Protein CLP1 OS=(Dandruff-associat...1760.0006     45.8     27     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
59P0CM76    548   CLP1_CRYNJ Protein CLP1 OS=ATCC MYA-565) (Fil...410.93     35.4     37     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
60P0CM77    548   CLP1_CRYNB Protein CLP1 OS=(Filobasidiella ne...410.93     35.4     37     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
61Q6FW56    630   GRC3_CANGA Polynucleotide 5'-hydroxyl-kinase ...910.0005     45.8     30     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0051731; F:polynucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
records
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