Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR217W
Length:
861
Number of sequences:
5887
Description:
YOR217W RFC1 SGDID:S000005743, Chr XV from 749301-751886, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P35250    354   RFC2_HUMAN Replication factor C subunit 2 OS=...2480.000000000001     73.6     25     46GO:0005663; C:DNA replication factor C complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; TAS:ProtInc.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000075; P:cell cycle checkpoint; TAS:Reactome.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
92Q975D3    327   RFCS_SULTO Replication factor C small subunit...2440.000000000003     72.4     28     42GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
93Q4QY64    1826   ATAD5_MOUSE ATPase family AAA domain-containi...1020.53     37.7     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.
94Q6L0P4    410   RFCL_PICTO Replication factor C large subunit...3540.000000000004     72.8     24     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
95A9A6K6    315   RFCS_METM6 Replication factor C small subunit...2560.000000000004     71.6     26     43GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
96Q09843    340   RFC2_SCHPO Replication factor C subunit 2 OS=...2780.000000000005     71.6     24     41GO:0031390; C:Ctf18 RFC-like complex; TAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005663; C:DNA replication factor C complex; ISS:PomBase.::GO:0031391; C:Elg1 RFC-like complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0031389; C:Rad17 RFC-like complex; TAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006270; P:DNA-dependent DNA replication initiation; IMP:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IMP:PomBase.
97Q5UP47    344   RFCS3_MIMIV Putative replication factor C sma...2760.000000000009     71.2     25     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
98Q5UQK9    533   RFCL_MIMIV Putative replication factor C larg...4270.00000000001     72     23     41GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
99Q96QE3    1844   ATAD5_HUMAN ATPase family AAA domain-containi...1450.011     43.5     26     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.
100Q6M044    315   RFCS_METMP Replication factor C small subunit...2560.00000000001     70.5     26     43GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
101A4FZ74    315   RFCS_METM5 Replication factor C small subunit...2560.00000000001     70.5     26     43GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
102A6VJ61    315   RFCS_METM7 Replication factor C small subunit...2560.00000000001     70.1     25     43GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
103A1RWU7    325   RFCS_THEPD Replication factor C small subunit...2490.00000000002     70.1     25     45GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
104P34429    368   RFC5_CAEEL Probable replication factor C subu...3100.00000000002     70.5     24     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.
105P53034    331   RFC2_DROME Replication factor C subunit 2 OS=...2480.00000000002     69.7     23     45GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IMP:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0000077; P:DNA damage checkpoint; IMP:FlyBase.::GO:0006281; P:DNA repair; TAS:FlyBase.::GO:0000076; P:DNA replication checkpoint; IMP:FlyBase.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:FlyBase.::GO:0016321; P:female meiosis chromosome segregation; IMP:FlyBase.::GO:0007076; P:mitotic chromosome condensation; IMP:FlyBase.
106O28219    319   RFCS_ARCFU Replication factor C small subunit...2540.00000000002     69.7     24     43GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
107P35249    363   RFC4_HUMAN Replication factor C subunit 4 OS=...2520.00000000005     68.9     27     44GO:0005663; C:DNA replication factor C complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000075; P:cell cycle checkpoint; TAS:Reactome.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; NAS:UniProtKB.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
108O74111    338   RFC3_BLAAD Replication factor C subunit 3 OS=...2420.00000000006     68.6     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.
109Q8SQM0    309   RFC4_ENCCU Replication factor C subunit 4 OS=...2460.00000000006     68.2     25     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
110B8HFJ3    770   DNLJ1_ARTCA DNA ligase 1 OS=JCM 12360). GN=li...1160.00000000008     69.7     42     59GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
111A4JF81    691   DNLJ_BURVG DNA ligase OS=cepacia (strain R180...900.00000000009     69.3     44     60GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
112A9H0L6    695   DNLJ_GLUDA DNA ligase OS=PAl5). GN=ligA Order...720.0000000001     68.9     51     71GO:0005622; C:intracellular; IEA:InterPro.
GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
113A7I8Y0    322   RFCS_METB6 Replication factor C small subunit...2530.0000000001     67.4     24     40GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
114P53016    334   RFC4_CAEEL Replication factor C subunit 4 OS=...2410.0000000001     67.4     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0045750; P:positive regulation of S phase of mitotic cell cycle; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
115B9MIW4    740   DNLJ_ACIET DNA ligase OS=Acidovorax ebreus (s...810.0000000001     68.6     46     63GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
116Q39F38    691   DNLJ_BURS3 DNA ligase OS=/ NCIB 9086 / R18194...900.0000000002     68.6     44     60GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
117Q47FA0    683   DNLJ_DECAR DNA ligase OS=Dechloromonas aromat...1200.0000000002     68.2     39     56GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
118A3CUX9    322   RFCS_METMJ Replication factor C small subunit...2490.0000000003     66.2     25     41GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
119A1WRA7    693   DNLJ_VEREI DNA ligase OS=Verminephrobacter ei...1000.0000000003     67.8     42     60GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
120Q99J62    364   RFC4_MOUSE Replication factor C subunit 4 OS=...2000.0000000003     66.6     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
121A4WLY0    322   RFCS2_PYRAR Replication factor C small subuni...2460.0000000003     65.9     25     44GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
records
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