UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YOR151C

Length:

1224

Number of sequences:

5887

Description:

YOR151C RPB2 SGDID:S000005677, Chr XV from 616671-612997, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subunit"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P08518	1224	RPB2_YEAST DNA-directed RNA polymerase II sub...	1224	0	2553	100	100	GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.
2	Q6FLD5	1223	RPB2_CANGA DNA-directed RNA polymerase II sub...	1223	0	2444	96	98	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
3	Q753Q4	1222	RPB2_ASHGO DNA-directed RNA polymerase II sub...	1204	0	2291	90	96	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
4	A5DHT2	1236	RPB2_PICGU DNA-directed RNA polymerase II sub...	1238	0	1998	78	88	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
5	Q02061	1210	RPB2_SCHPO DNA-directed RNA polymerase II sub...	1204	0	1769	69	85	GO:0000775; C:chromosome, centromeric region; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
									GO:0003677; F:DNA binding; IDA:PomBase.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:PomBase.
									GO:0031048; P:chromatin silencing by small RNA; IMP:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IGI:PomBase.
6	Q42877	1191	RPB2_SOLLC DNA-directed RNA polymerase II sub...	1212	0	1511	61	76	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
7	P38420	1188	RPB2_ARATH DNA-directed RNA polymerase II sub...	1221	0	1509	61	75	GO:0005829; C:cytosol; IDA:TAIR.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IPI:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
8	Q54J75	1170	RPB2_DICDI DNA-directed RNA polymerase II sub...	1205	0	1499	60	77	GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase.
9	P30876	1174	RPB2_HUMAN DNA-directed RNA polymerase II sub...	1224	0	1449	58	73	GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
									GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
10	Q8CFI7	1174	RPB2_MOUSE DNA-directed RNA polymerase II sub...	1224	0	1447	58	73	GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
11	P08266	1176	RPB2_DROME DNA-directed RNA polymerase II sub...	1204	0	1430	58	73	GO:0005665; C:DNA-directed RNA polymerase II, core complex; NAS:UniProtKB.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006366; P:transcription from RNA polymerase II promoter; NAS:UniProtKB.
12	Q10578	1193	RPB2_CAEEL DNA-directed RNA polymerase II sub...	1209	0	1400	57	72	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0016477; P:cell migration; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
13	Q8SR75	1141	RPB2_ENCCU DNA-directed RNA polymerase II sub...	1198	0	1397	57	74	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
14	P11513	1126	RPOB_SULAC DNA-directed RNA polymerase subuni...	1205	0	851	41	58
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
15	P31814	1122	RPOB_THECE DNA-directed RNA polymerase subuni...	1203	0	839	40	58
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
16	Q10233	1165	RPC2_SCHPO DNA-directed RNA polymerase III su...	1216	0	785	38	55	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; NAS:PomBase.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006383; P:transcription from RNA polymerase III promoter; NAS:PomBase.
17	Q9NW08	1133	RPC2_HUMAN DNA-directed RNA polymerase III su...	1219	0	764	38	56	GO:0005654; C:nucleoplasm; TAS:Reactome.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; IMP:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.
18	P59470	1133	RPC2_MOUSE DNA-directed RNA polymerase III su...	1219	0	762	38	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
19	P22276	1149	RPC2_YEAST DNA-directed RNA polymerase III su...	1204	0	761	38	56	GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
20	Q03587	1195	RPOB_THEAC DNA-directed RNA polymerase subuni...	1260	0	745	36	55
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
21	P25167	1137	RPC2_DROME DNA-directed RNA polymerase III su...	1224	0	738	36	55	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
22	Q7T6X7	1196	RPO2_MIMIV DNA-directed RNA polymerase subuni...	1246	0	719	36	55	GO:0019012; C:virion; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
23	Q91F97	1193	RPB2_IIV6 Probable DNA-directed RNA polymeras...	1262	0	605	33	51
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
24	Q197F1	1140	RPB2_IIV3 Probable DNA-directed RNA polymeras...	1242	0	594	33	52
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
25	O27124	603	RPOB1_METTH DNA-directed RNA polymerase subun...	641	0	557	44	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
26	P09845	604	RPOB1_METTW DNA-directed RNA polymerase subun...	644	0	552	44	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
27	Q9LV32	1119	RPD2B_ARATH DNA-directed RNA polymerase D sub...	1215	6e-174	551	33	50	GO:0000418; C:DNA-directed RNA polymerase IV complex; ISS:UniProtKB.::GO:0000419; C:DNA-directed RNA polymerase V complex; ISS:UniProtKB.::GO:0016020; C:membrane; IDA:TAIR.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
28	P0CX03	608	RPOB1_HALSA DNA-directed RNA polymerase subun...	644	6e-173	531	43	62
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
29	B0R8D5	608	RPOB1_HALS3 DNA-directed RNA polymerase subun...	644	6e-173	531	43	62
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
30	O28392	604	RPOB1_ARCFU DNA-directed RNA polymerase subun...	638	1e-169	523	44	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
31	Q60181	636	RPOB1_METJA DNA-directed RNA polymerase subun...	643	1e-165	514	43	59
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.

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