rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P04051 | 1460 | RPC1_YEAST DNA-directed RNA polymerase III su... | 1460 | 0 | 3028 | 100 | 100 | GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD. | 2 | Q6BI69 | 1457 | RPC1_DEBHA DNA-directed RNA polymerase III su... | 1466 | 0 | 2332 | 77 | 87 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 3 | O94666 | 1405 | RPC1_SCHPO DNA-directed RNA polymerase III su... | 1455 | 0 | 1697 | 58 | 74 | GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006383; P:transcription from RNA polymerase III promoter; ISS:PomBase. | 4 | O14802 | 1390 | RPC1_HUMAN DNA-directed RNA polymerase III su... | 1431 | 0 | 1415 | 51 | 68 | GO:0005666; C:DNA-directed RNA polymerase III complex; NAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IMP:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome. | 5 | A4IF62 | 1390 | RPC1_BOVIN DNA-directed RNA polymerase III su... | 1445 | 0 | 1412 | 50 | 68 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 6 | Q5ZL98 | 1390 | RPC1_CHICK DNA-directed RNA polymerase III su... | 1445 | 0 | 1412 | 50 | 68 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 7 | Q86AQ5 | 1450 | RPC1_DICDI DNA-directed RNA polymerase III su... | 395 | 6e-112 | 392 | 51 | 71 | GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase. | 8 | P35084 | 1727 | RPB1_DICDI DNA-directed RNA polymerase II sub... | 1524 | 0 | 805 | 36 | 53 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; ISS:dictyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 9 | P18616 | 1839 | RPB1_ARATH DNA-directed RNA polymerase II sub... | 1522 | 0 | 776 | 34 | 52 | GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IPI:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0005773; C:vacuole; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 10 | P36594 | 1752 | RPB1_SCHPO DNA-directed RNA polymerase II sub... | 1505 | 0 | 763 | 34 | 53 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; TAS:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:PomBase.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IC:PomBase. | 11 | P08968 | 1530 | RPC1_TRYBB DNA-directed RNA polymerase III su... | 402 | 8e-71 | 266 | 41 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 12 | P04052 | 1887 | RPB1_DROME DNA-directed RNA polymerase II sub... | 1506 | 0 | 738 | 33 | 52 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase. | 13 | P04050 | 1733 | RPB1_YEAST DNA-directed RNA polymerase II sub... | 1521 | 0 | 725 | 34 | 52 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD. | 14 | Q75A34 | 1745 | RPB1_ASHGO DNA-directed RNA polymerase II sub... | 1511 | 0 | 722 | 34 | 51 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 15 | Q8SSC4 | 1599 | RPB1_ENCCU DNA-directed RNA polymerase II sub... | 1501 | 0 | 696 | 33 | 51 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 16 | P25202 | 1741 | RPC1_GIAIN DNA-directed RNA polymerase III su... | 518 | 4e-45 | 183 | 30 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 17 | P11512 | 880 | RPOA1_SULAC DNA-directed RNA polymerase subun... | 936 | 0 | 657 | 40 | 57 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 18 | P31813 | 905 | RPOA1_THECE DNA-directed RNA polymerase subun... | 944 | 0 | 649 | 39 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 19 | Q980R2 | 880 | RPOA1_SULSO DNA-directed RNA polymerase subun... | 935 | 0 | 640 | 39 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 20 | P41556 | 889 | RPOA1_METVS DNA-directed RNA polymerase subun... | 923 | 0 | 616 | 38 | 57 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 21 | P0CX02 | 971 | RPOA1_HALSA DNA-directed RNA polymerase subun... | 978 | 0 | 605 | 36 | 54 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 22 | B0R8D4 | 971 | RPOA1_HALS3 DNA-directed RNA polymerase subun... | 978 | 0 | 605 | 36 | 54 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 23 | O27125 | 870 | RPOA1_METTH DNA-directed RNA polymerase subun... | 919 | 0 | 595 | 37 | 57 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 24 | P16356 | 1856 | RPB1_CAEEL DNA-directed RNA polymerase II sub... | 404 | 6e-50 | 199 | 35 | 52 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001055; F:RNA polymerase II activity; IMP:WormBase. | | | | | | | | | | GO:0008356; P:asymmetric cell division; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0010458; P:exit from mitosis; IMP:WormBase.::GO:0007369; P:gastrulation; IMP:WormBase.::GO:0007052; P:mitotic spindle organization; IMP:WormBase.::GO:0042789; P:mRNA transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006479; P:protein methylation; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase. | 25 | P35074 | 1853 | RPB1_CAEBR DNA-directed RNA polymerase II sub... | 405 | 3e-48 | 193 | 36 | 52 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 26 | Q03585 | 885 | RPOA1_THEAC DNA-directed RNA polymerase subun... | 941 | 6e-179 | 563 | 36 | 54 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 27 | P24928 | 1970 | RPB1_HUMAN DNA-directed RNA polymerase II sub... | 427 | 2e-46 | 187 | 32 | 50 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0031625; F:ubiquitin protein ligase binding; IPI:BHF-UCL. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 28 | P08775 | 1970 | RPB1_MOUSE DNA-directed RNA polymerase II sub... | 427 | 2e-46 | 187 | 32 | 50 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:MGI.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 29 | P09846 | 865 | RPOA1_METTW DNA-directed RNA polymerase subun... | 919 | 2e-172 | 545 | 35 | 55 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | P27625 | 2339 | RPC1_PLAFA DNA-directed RNA polymerase III su... | 139 | 1e-31 | 139 | 47 | 68 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | P17545 | 1766 | RPB1B_TRYBB DNA-directed RNA polymerase II su... | 421 | 5e-34 | 147 | 29 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | |