Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR116C
Length:
1460
Number of sequences:
5887
Description:
YOR116C RPO31 SGDID:S000005642, Chr XV from 544145-539763, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase III largest subunit C160, part of core enzyme; similar to bacterial beta-prime subunit and to RPA190 and RPO21"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P17545    1766   RPB1B_TRYBB DNA-directed RNA polymerase II su...4215e-34     147     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
32P17546    1766   RPB1A_TRYBB DNA-directed RNA polymerase II su...4215e-34     147     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
33Q7T6X5    1495   RPO1_MIMIV DNA-directed RNA polymerase subuni...1160.000000009     64.3     34     54GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
34P10964    1664   RPA1_YEAST DNA-directed RNA polymerase I subu...1160.015     43.9     25     46GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD.
35P91875    1642   RPA1_DROME DNA-directed RNA polymerase I subu...1140.0002     50.1     29     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
36P15398    1689   RPA1_SCHPO DNA-directed RNA polymerase I subu...1160.000003     55.8     28     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006406; P:mRNA export from nucleus; IMP:PomBase.::GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0034503; P:protein localization to nucleolar rDNA repeats; IMP:PomBase.::GO:0006360; P:transcription from RNA polymerase I promoter; ISS:PomBase.
37O35134    1717   RPA1_MOUSE DNA-directed RNA polymerase I subu...1400.00000006     61.6     29     48GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
38O95602    1720   RPA1_HUMAN DNA-directed RNA polymerase I subu...1370.0000002     59.7     28     50GO:0005736; C:DNA-directed RNA polymerase I complex; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
39O54889    1716   RPA1_RAT DNA-directed RNA polymerase I subuni...1400.00002     52.8     27     48GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:RGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009303; P:rRNA transcription; IDA:RGD.
40A5DCV3    1579   RPB1_PICGU DNA-directed RNA polymerase II sub...6003e-96     345     38     54GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
41Q86H36    1615   RPA1_DICDI DNA-directed RNA polymerase I subu...1170.00000004     62     27     49GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.
42P14248    2452   RPB1_PLAFD DNA-directed RNA polymerase II sub...1713e-21     105     36     56GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
43O55766    1026   RPB1_IIV6 Probable DNA-directed RNA polymeras...10776e-96     338     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
44P16355    1744   RPA1_TRYBB DNA-directed RNA polymerase I subu...1900.0001     50.8     25     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
45Q196X0    1377   RPB1_IIV3 Probable DNA-directed RNA polymeras...4132e-16     89     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
46Q58445    1341   RPOA1_METJA DNA-directed RNA polymerase subun...4365e-86     312     40     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
47P28364    478   RPB1_EUPOC DNA-directed RNA polymerase II sub...5051e-82     285     35     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
48P42486    1450   RPB1_ASFB7 Probable DNA-directed RNA polymera...4190.00000005     61.6     22     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
49P0C988    1450   RPB1_ASFWA Probable DNA-directed RNA polymera...4190.00000006     61.6     22     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
50Q65215    1450   RPB1_ASFM2 Probable DNA-directed RNA polymera...4190.00000006     61.2     22     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
51P0C989    1450   RPB1_ASFK5 Probable DNA-directed RNA polymera...4250.00000004     62     21     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
52P0C987    1450   RPB1_ASFP4 Probable DNA-directed RNA polymera...4190.00000005     61.6     22     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
53Q6GZW7    1293   RPB1_FRG3G Putative DNA-directed RNA polymera...1050.000001     57     32     48
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
54O28390    380   RPOA2_ARCFU DNA-directed RNA polymerase subun...3873e-62     223     36     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
55P14247    386   RPOA2_METVS DNA-directed RNA polymerase subun...3732e-61     221     38     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
56P15349    349   RPOA1_HALMO DNA-directed RNA polymerase subun...2789e-60     215     40     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
57Q8PUR2    408   RPOA2_METMA DNA-directed RNA polymerase subun...3778e-59     214     37     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
58A6UV49    397   RPOA2_META3 DNA-directed RNA polymerase subun...3745e-58     212     37     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
59B1YGU3    1199   RPOC_EXIS2 DNA-directed RNA polymerase subuni...590.005     45.4     44     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
60Q8TRB8    397   RPOA2_METAC DNA-directed RNA polymerase subun...3613e-57     210     38     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
61P29158    393   RPOA2_THECE DNA-directed RNA polymerase subun...4074e-57     209     36     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
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