Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR048C
Length:
1006
Number of sequences:
5887
Description:
YOR048C RAT1 SGDID:S000005574, Chr XV from 421650-418630, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as poly (A+) dependent and independent mRNA transcription termination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q9QSK5    624   EXON_IIV6 Putative exonuclease 012L OS=Invert...2600.0000004     57.8     24     38GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
32Q197A1    560   EX0N_IIV3 Putative exonuclease 059L OS=Invert...1530.000000000004     73.6     29     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
33Q5UQ94    621   YR528_MIMIV Putative 5'-3' exonuclease R528 O...2030.12     40     22     41GO:0005622; C:intracellular; IEA:InterPro.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
34O51741    882   IF2_BORBU Translation initiation factor IF-2 ...889.9     33.9     34     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
35Q0SM50    782   IF2_BORAP Translation initiation factor IF-2 ...850.2     39.3     31     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
36P45443    4367   DYHC_NEUCR Dynein heavy chain, cytoplasmic OS...3090.22     39.3     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
37Q65ZX2    883   IF2_BORGA Translation initiation factor IF-2 ...910.62     37.7     34     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
38P0CR57    594   PRP45_CRYNB Pre-mRNA-processing protein 45 OS...740.73     37.4     38     53GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
39Q48AW4    156   ATPF_COLP3 ATP synthase subunit b OS=psychroe...1352.7     34.3     27     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.
GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro.
GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
40P16747    113   UL67_HCMVA Uncharacterized protein UL67 OS=Hu...605.4     32.3     28     48
records
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