Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR006C
Length:
313
Number of sequences:
5887
Description:
YOR006C TSR3 SGDID:S000005532, Chr XV from 338621-337680, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein required for correct processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12094    313   TSR3_YEAST Ribosome biogenesis protein TSR3 O...3130     646     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0030490; P:maturation of SSU-rRNA; IMP:SGD.
2Q10409    288   TSR3_SCHPO Ribosome biogenesis protein tsr3 O...2344e-83     259     53     72GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005634; C:nucleus; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
3Q9UJK0    312   TSR3_HUMAN Probable ribosome biogenesis prote...2145e-67     218     50     67
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
4Q5HZH2    323   TSR3_MOUSE Probable ribosome biogenesis prote...1761e-62     207     53     69
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
5Q2NET3    171   TSR3_METST Probable ribosome biogenesis prote...1684e-32     122     36     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
6Q12ZL9    173   TSR3_METBU Probable ribosome biogenesis prote...1675e-31     120     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
7Q9HNJ6    176   TSR3_HALSA Probable ribosome biogenesis prote...1562e-30     118     42     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
8Q9UWV6    166   TSR3_SULSO Probable ribosome biogenesis prote...1683e-30     117     38     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
9B0R700    165   TSR3_HALS3 Probable ribosome biogenesis prote...1563e-30     117     42     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
10O26654    169   TSR3_METTH Probable ribosome biogenesis prote...1673e-28     112     34     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
11Q469W0    173   TSR3_METBF Probable ribosome biogenesis prote...1692e-27     110     36     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
12Q975W6    167   TSR3_SULTO Probable ribosome biogenesis prote...1682e-27     109     35     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
13Q8TXM4    169   TSR3_METKA Probable ribosome biogenesis prote...1584e-27     109     39     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
14Q58118    172   TSR3_METJA Probable ribosome biogenesis prote...1703e-26     107     32     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
15Q8PSK5    173   TSR3_METMA Probable ribosome biogenesis prote...1696e-26     105     33     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
16Q8TMY6    174   TSR3_METAC Probable ribosome biogenesis prote...1691e-25     105     33     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
17A5UJF3    171   TSR3_METS3 Probable ribosome biogenesis prote...1713e-25     104     34     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
18C3N6E6    166   TSR3_SULIA Probable ribosome biogenesis prote...1493e-25     103     36     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
19C3NEV4    166   TSR3_SULIY Probable ribosome biogenesis prote...1492e-24     101     35     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
20C3NGU0    166   TSR3_SULIN Probable ribosome biogenesis prote...1492e-24     101     35     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
21C3MWA4    166   TSR3_SULIM Probable ribosome biogenesis prote...1492e-24     101     35     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
22C3MQM6    166   TSR3_SULIL Probable ribosome biogenesis prote...1492e-24     101     35     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
23C4KHW1    166   TSR3_SULIK Probable ribosome biogenesis prote...1492e-24     101     35     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
24Q97CM6    164   TSR3_THEVO Probable ribosome biogenesis prote...1542e-24     101     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
25Q9HM46    163   TSR3_THEAC Probable ribosome biogenesis prote...1547e-23     97.1     36     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
26Q54G57    2195   HELC1_DICDI Activating signal cointegrator 1 ...1100.47     36.2     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
27Q6P1Y8    924   INP4B_MOUSE Type II inositol 3,4-bisphosphate...1360.97     35     26     42
GO:0016316; F:phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity; IEA:EC.::GO:0034597; F:phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity; IEA:EC.
28Q02440    1829   MYO5A_CHICK Unconventional myosin-Va OS=Gallu...1111.9     34.3     24     50GO:0031941; C:filamentous actin; IDA:UniProtKB.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016459; C:myosin complex; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0060001; F:minus-end directed microfilament motor activity; IDA:UniProtKB.
29Q96662    3907   POLG_BVDVC Genome polyprotein OS=virus). GN= ...936.6     32.3     22     49GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0044228; C:host cell surface; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.::GO:0033897; F:ribonuclease T2 activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.::GO:0070008; F:serine-type exopeptidase activity; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
30Q8UE08    1378   RPOB_AGRT5 DNA-directed RNA polymerase subuni...1227.1     32.3     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
31Q5RCR9    314   CPPED_PONAB Calcineurin-like phosphoesterase ...438.2     31.6     33     58
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
records
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