Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOR005C
Length:
944
Number of sequences:
5887
Description:
YOR005C DNL4 SGDID:S000005531, Chr XV from 337343-334509, Genome Release 64-1-1, reverse complement, Verified ORF, "DNA ligase required for nonhomologous end-joining (NHEJ), forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q18HT7    618   DNLI1_HALWD DNA ligase 1 OS=Haloquadratum wal...2480.00008     50.1     25     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
152P59971    759   Y963_MYCBO Putative DNA ligase-like protein M...2170.001     46.6     26     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.::GO:0003896; F:DNA primase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:InterPro.
153P71571    759   Y938_MYCTU Putative DNA ligase-like protein R...2170.001     46.6     26     40GO:0005886; C:plasma membrane; IDA:MTBBASE.
GO:0005524; F:ATP binding; IDA:MTBBASE.::GO:0003910; F:DNA ligase (ATP) activity; IDA:MTBBASE.::GO:0003896; F:DNA primase activity; IDA:MTBBASE.::GO:0003887; F:DNA-directed DNA polymerase activity; IDA:MTBBASE.::GO:0000287; F:magnesium ion binding; IDA:MTBBASE.::GO:0030145; F:manganese ion binding; IDA:MTBBASE.::GO:0004652; F:polynucleotide adenylyltransferase activity; IDA:MTBBASE.::GO:0005515; F:protein binding; IPI:MTBBASE.::GO:0008310; F:single-stranded DNA specific 3'-5' exodeoxyribonuclease activity; IDA:MTBBASE.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006269; P:DNA replication, synthesis of RNA primer; IDA:MTBBASE.::GO:0006303; P:double-strand break repair via nonhomologous end joining; IDA:MTBBASE.
154A7HID3    519   DNLI_ANADF Probable DNA ligase OS=Anaeromyxob...2150.002     45.8     25     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
155O34398    611   YKOU_BACSU Probable ATP-dependent DNA ligase ...1960.002     45.8     27     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003910; F:DNA ligase (ATP) activity; ISS:RefGenome.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
156A5UKX2    551   DNLI_METS3 DNA ligase OS=Methanobrevibacter s...2670.002     45.8     26     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
157Q7SB53    402   MCE1_NEUCR mRNA-capping enzyme subunit alpha ...2210.12     39.7     22     41GO:0031533; C:mRNA cap methyltransferase complex; IEA:InterPro.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0004484; F:mRNA guanylyltransferase activity; IEA:EC.
GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.
158B5Z8J0    692   EFG_HELPG Elongation factor G OS=Helicobacter...1670.91     37     27     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
159Q9ZK24    692   EFG_HELPJ Elongation factor G OS=Helicobacter...1671.2     36.6     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
160Q1CS71    692   EFG_HELPH Elongation factor G OS=Helicobacter...1671.3     36.6     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
161Q17VN9    692   EFG_HELAH Elongation factor G OS=Helicobacter...1671.3     36.6     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
162P56002    692   EFG_HELPY Elongation factor G OS=pylori). GN=...1671.4     36.6     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
163B6JN34    692   EFG_HELP2 Elongation factor G OS=Helicobacter...1671.7     36.2     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
164B2UUV6    692   EFG_HELPS Elongation factor G OS=Helicobacter...1671.9     36.2     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
165O94623    935   REV1_SCHPO DNA repair protein rev1 OS=Schizos...1411.9     36.2     26     42GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0017125; F:deoxycytidyl transferase activity; ISS:PomBase.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.::GO:0000287; F:magnesium ion binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0043504; P:mitochondrial DNA repair; IC:PomBase.
166Q5ZKP6    357   ADA_CHICK Adenosine deaminase OS=Gallus gallu...838.2     33.5     29     52GO:0030054; C:cell junction; IEA:UniProtKB-SubCell.::GO:0060205; C:cytoplasmic membrane-bounded vesicle lumen; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IBA:RefGenome.::GO:0009897; C:external side of plasma membrane; IBA:RefGenome.
GO:0004000; F:adenosine deaminase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0006154; P:adenosine catabolic process; ISS:UniProtKB.::GO:0043103; P:hypoxanthine salvage; IBA:RefGenome.::GO:0046103; P:inosine biosynthetic process; ISS:UniProtKB.::GO:0060169; P:negative regulation of adenosine receptor signaling pathway; IBA:RefGenome.::GO:0009168; P:purine ribonucleoside monophosphate biosynthetic process; IEA:InterPro.::GO:0042110; P:T cell activation; IBA:RefGenome.
167Q10337    878   BRC1_SCHPO BRCT-containing protein 1 OS=Schiz...399.2     33.9     36     64GO:0005634; C:nucleus; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IGI:PomBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; IMP:PomBase.::GO:0000018; P:regulation of DNA recombination; IMP:PomBase.
records
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