Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL145C
Length:
1077
Number of sequences:
5887
Description:
YOL145C CTR9 SGDID:S000005505, Chr XV from 52788-49555, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cyclin genes; contains TPR repeats; possibly involved in transcription elongation as a component of the PAF complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P89105    1077   CTR9_YEAST RNA polymerase-associated protein ...10770     2204     100     100GO:0016593; C:Cdc73/Paf1 complex; IPI:SGD.::GO:0035327; C:transcriptionally active chromatin; IDA:SGD.
GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0001076; F:RNA polymerase II transcription factor binding transcription factor activity; IPI:SGD.::GO:0045142; F:triplex DNA binding; IDA:SGD.
GO:0031124; P:mRNA 3'-end processing; IMP:SGD.::GO:2001255; P:positive regulation of histone H3-K36 trimethylation; IMP:SGD.::GO:2001165; P:positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues; IMP:SGD.::GO:2001209; P:positive regulation of transcription elongation from RNA polymerase I promoter; IDA:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:2001173; P:regulation of histone H2B conserved C-terminal lysine ubiquitination; IDA:SGD.::GO:0051569; P:regulation of histone H3-K4 methylation; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0060260; P:regulation of transcription initiation from RNA polymerase II promoter; IMP:SGD.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; IMP:SGD.::GO:0031126; P:snoRNA 3'-end processing; IMP:SGD.::GO:0001015; P:snoRNA transcription from an RNA polymerase II promoter; IMP:SGD.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; IMP:SGD.
2O42668    1039   TPR1_SCHPO Tetratricopeptide repeat protein 1...10741e-121     405     30     52GO:0016593; C:Cdc73/Paf1 complex; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0006813; P:potassium ion transport; IMP:PomBase.::GO:0038032; P:termination of G-protein coupled receptor signaling pathway; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
3Q6PD62    1173   CTR9_HUMAN RNA polymerase-associated protein ...9742e-47     188     25     46GO:0016593; C:Cdc73/Paf1 complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0001711; P:endodermal cell fate commitment; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; IDA:UniProtKB.::GO:0080182; P:histone H3-K4 trimethylation; IMP:UniProtKB.::GO:0010390; P:histone monoubiquitination; IDA:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; IMP:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0019827; P:stem cell maintenance; IDA:UniProtKB.
4Q62018    1173   CTR9_MOUSE RNA polymerase-associated protein ...9748e-47     186     25     46GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0035327; C:transcriptionally active chromatin; IDA:UniProtKB.
GO:0042169; F:SH2 domain binding; IDA:MGI.
GO:0001711; P:endodermal cell fate commitment; IMP:UniProtKB.::GO:0080182; P:histone H3-K4 trimethylation; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; IMP:UniProtKB.
5Q6DEU9    1172   CTR9_XENTR RNA polymerase-associated protein ...9803e-46     185     25     45GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0001711; P:endodermal cell fate commitment; ISS:UniProtKB.::GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB.
6Q4QR29    1157   CTR9_XENLA RNA polymerase-associated protein ...10833e-44     178     24     43GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
7Q03560    1150   YKD1_CAEEL TPR repeat-containing protein B046...9865e-32     139     24     44
GO:0005488; F:binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
8Q96AY4    2481   TTC28_HUMAN Tetratricopeptide repeat protein ...1480.023     42.7     25     43
GO:0005488; F:binding; IEA:InterPro.
9P14922    966   CYC8_YEAST General transcriptional corepresso...1970.034     42     22     42GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; IDA:SGD.
GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
10O77033    1390   CYC8_DICDI General transcriptional corepresso...1570.052     41.6     29     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11A2R7P5    1201   NST1_ASPNC Stress response protein nst1 OS=As...1050.053     41.6     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
12Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...1051.9     36.6     21     43GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
13Q8LGU6    744   CD27B_ARATH Cell division cycle protein 27 ho...860.1     40.4     33     51GO:0005680; C:anaphase-promoting complex; IPI:TAIR.::GO:0009504; C:cell plate; IDA:TAIR.::GO:0005819; C:spindle; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0030154; P:cell differentiation; IMP:TAIR.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007276; P:gamete generation; IGI:TAIR.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051302; P:regulation of cell division; IGI:TAIR.::GO:0007346; P:regulation of mitotic cell cycle; IMP:TAIR.::GO:0051510; P:regulation of unidimensional cell growth; IGI:TAIR.::GO:0009733; P:response to auxin stimulus; IMP:TAIR.::GO:0048829; P:root cap development; IMP:TAIR.::GO:0010071; P:root meristem specification; IMP:TAIR.
14Q80XJ3    1691   TTC28_MOUSE Tetratricopeptide repeat protein ...1480.16     40     24     42
GO:0005488; F:binding; IEA:InterPro.
15Q58823    567   Y1428_METJA TPR repeat-containing protein MJ1...2500.24     38.9     23     42
GO:0005488; F:binding; IEA:InterPro.
16Q06AN9    717   CD27A_ARATH Cell division cycle protein 27 ho...690.3     38.9     35     54GO:0005680; C:anaphase-promoting complex; IPI:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007276; P:gamete generation; IGI:TAIR.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051302; P:regulation of cell division; IGI:TAIR.::GO:0051510; P:regulation of unidimensional cell growth; IGI:TAIR.
17Q752A3    1265   TOF1_ASHGO Topoisomerase 1-associated factor ...1070.68     37.7     35     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0008156; P:negative regulation of DNA replication; IEA:UniProtKB-KW.
18P0C1J7    385   FKBP5_RHIO9 FK506-binding protein 5 OS=43880)...660.69     37.4     30     53
GO:0005488; F:binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.
19Q9CRD2    297   TTC35_MOUSE Tetratricopeptide repeat protein ...1651.1     36.6     28     42GO:0005739; C:mitochondrion; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
20Q5R882    297   TTC35_PONAB Tetratricopeptide repeat protein ...1651.1     36.6     28     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
21Q58208    334   Y798_METJA TPR repeat-containing protein MJ07...1441.1     36.6     28     47
GO:0005488; F:binding; IEA:InterPro.
22B0BNG0    297   TTC35_RAT Tetratricopeptide repeat protein 35...1651.1     36.6     28     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
23Q15006    297   TTC35_HUMAN Tetratricopeptide repeat protein ...1651.2     36.2     28     42GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
24P19737    387   Y425_SYNP2 TPR repeat-containing protein SYNP...1741.7     36.2     21     43
GO:0005488; F:binding; IEA:InterPro.
25Q9SY69    913   PPR29_ARATH Pentatricopeptide repeat-containi...842.2     36.2     32     49GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IMP:TAIR.::GO:0009790; P:embryo development; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
26O70546    1401   KDM6A_MOUSE Lysine-specific demethylase 6A OS...1302.9     35.8     29     49GO:0035097; C:histone methyltransferase complex; IDA:MGI.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
27O60184    1102   CYC8_SCHPO General transcriptional corepresso...763.2     35.4     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0016584; P:nucleosome positioning; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28P38825    639   TOM71_YEAST Protein TOM71 OS=Saccharomyces ce...2343.8     35     24     41GO:0031307; C:integral to mitochondrial outer membrane; IDA:SGD.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IDA:SGD.
29O15550    1401   KDM6A_HUMAN Lysine-specific demethylase 6A OS...1304.4     35     28     49
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0051568; P:histone H3-K4 methylation; ISS:UniProtKB.
30P17883    1432   SKI3_YEAST Superkiller protein 3 OS=Saccharom...1294.6     35     29     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0055087; C:Ski complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IMP:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
31B8I2T4    465   MURD_CLOCE UDP-N-acetylmuramoylalanine--D-glu...1284.8     34.7     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008764; F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity; IEA:EC.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.::GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
records
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