rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q08285 | 240 | RRP40_YEAST Exosome complex component RRP40 O... | 240 | 7e-179 | 498 | 100 | 100 | GO:0000177; C:cytoplasmic exosome (RNase complex); IDA:SGD.::GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0030145; F:manganese ion binding; IDA:SGD.::GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0070651; P:nonfunctional rRNA decay; IC:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IC:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IC:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IC:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IC:SGD. | 2 | O13903 | 240 | RRP40_SCHPO Exosome complex component rrp40 O... | 228 | 2e-45 | 158 | 38 | 59 | GO:0000177; C:cytoplasmic exosome (RNase complex); ISS:PomBase.::GO:0000176; C:nuclear exosome (RNase complex); ISS:PomBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0070651; P:nonfunctional rRNA decay; ISS:PomBase.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; ISS:PomBase.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; ISS:PomBase.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; ISS:PomBase.::GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; ISS:PomBase.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; ISS:PomBase. | 3 | Q7TQK4 | 274 | EXOS3_MOUSE Exosome complex component RRP40 O... | 175 | 8e-33 | 125 | 38 | 57 | GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045190; P:isotype switching; IMP:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 4 | Q7KWX9 | 237 | EXOS3_DICDI Putative exosome complex componen... | 208 | 3e-32 | 123 | 35 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 5 | Q3T0E1 | 275 | EXOS3_BOVIN Exosome complex component RRP40 O... | 188 | 5e-32 | 123 | 37 | 54 | GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 6 | Q9NQT5 | 275 | EXOS3_HUMAN Exosome complex component RRP40 O... | 188 | 2e-31 | 121 | 36 | 54 | GO:0000177; C:cytoplasmic exosome (RNase complex); IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0000176; C:nuclear exosome (RNase complex); IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IMP:UniProtKB. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0071034; P:CUT catabolic process; IMP:UniProtKB.::GO:0045006; P:DNA deamination; IDA:UniProtKB.::GO:0043928; P:exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay; IMP:UniProtKB.::GO:0045190; P:isotype switching; ISS:UniProtKB.::GO:0006364; P:rRNA processing; IDA:UniProtKB. | 7 | E0SQX5 | 253 | ECR1_IGNAA Probable exosome complex RNA-bindi... | 146 | 0.000001 | 52 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 8 | A9A5C8 | 226 | ECR1_NITMS Probable exosome complex RNA-bindi... | 182 | 0.000002 | 50.8 | 24 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 9 | O29758 | 223 | ECR1_ARCFU Probable exosome complex RNA-bindi... | 208 | 0.00003 | 47.4 | 23 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 10 | Q4JB26 | 249 | ECR1_SULAC Probable exosome complex RNA-bindi... | 168 | 0.0002 | 45.1 | 26 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 11 | B1L6N8 | 228 | ECR1_KORCO Probable exosome complex RNA-bindi... | 168 | 0.0003 | 44.7 | 23 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 12 | Q6L222 | 230 | ECR1_PICTO Probable exosome complex RNA-bindi... | 145 | 0.0003 | 44.7 | 24 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 13 | A5UJS0 | 298 | ECR1_METS3 Probable exosome complex RNA-bindi... | 138 | 0.001 | 43.1 | 24 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 14 | Q975G7 | 247 | ECR1_SULTO Probable exosome complex RNA-bindi... | 142 | 0.001 | 42.4 | 27 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 15 | Q12ZB8 | 263 | ECR1_METBU Probable exosome complex RNA-bindi... | 138 | 0.001 | 42.4 | 26 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 16 | Q97BZ6 | 236 | ECR1_THEVO Probable exosome complex RNA-bindi... | 240 | 0.002 | 42.4 | 23 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 17 | D5U396 | 247 | ECR1_THEAM Probable exosome complex RNA-bindi... | 147 | 0.007 | 40.4 | 23 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 18 | Q9UXC4 | 249 | ECR1_SULSO Probable exosome complex RNA-bindi... | 145 | 0.016 | 39.3 | 24 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 19 | Q13868 | 293 | EXOS2_HUMAN Exosome complex component RRP4 OS... | 145 | 0.037 | 38.1 | 26 | 38 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0000178; C:exosome (RNase complex); IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; TAS:ProtInc.::GO:0008312; F:7S RNA binding; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0043928; P:exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay; TAS:Reactome.::GO:0030307; P:positive regulation of cell growth; IMP:UniProtKB.::GO:0006364; P:rRNA processing; TAS:ProtInc. | 20 | Q9HIP3 | 236 | ECR1_THEAC Probable exosome complex RNA-bindi... | 137 | 0.073 | 37.4 | 21 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 21 | Q9YC02 | 235 | ECR1_AERPE Probable exosome complex RNA-bindi... | 151 | 0.17 | 36.2 | 23 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 22 | Q469M4 | 260 | ECR1_METBF Probable exosome complex RNA-bindi... | 135 | 0.19 | 36.2 | 25 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 23 | Q2NEX6 | 222 | ECR1_METST Probable exosome complex RNA-bindi... | 137 | 0.19 | 35.8 | 26 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 24 | Q9V120 | 265 | ECR1_PYRAB Probable exosome complex RNA-bindi... | 171 | 0.2 | 35.8 | 23 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:HAMAP. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:HAMAP. | 25 | Q5JIR5 | 257 | ECR1_PYRKO Probable exosome complex RNA-bindi... | 190 | 0.21 | 35.8 | 24 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 26 | Q8U0L8 | 264 | ECR1_PYRFU Probable exosome complex RNA-bindi... | 170 | 0.21 | 35.8 | 21 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 27 | Q8TYC0 | 239 | ECR1_METKA Probable exosome complex RNA-bindi... | 202 | 0.33 | 35 | 19 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 28 | Q8PTT9 | 260 | ECR1_METMA Probable exosome complex RNA-bindi... | 159 | 0.44 | 35 | 26 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 29 | O59221 | 265 | ECR1_PYRHO Probable exosome complex RNA-bindi... | 177 | 0.7 | 34.3 | 22 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 30 | E3GZ90 | 222 | ECR1_METFV Probable exosome complex RNA-bindi... | 140 | 1.1 | 33.5 | 24 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 31 | Q8NK02 | 526 | CBHB_EMENI 1,4-beta-D-glucan cellobiohydrolas... | 62 | 1.7 | 33.5 | 31 | 58 | GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016162; F:cellulose 1,4-beta-cellobiosidase activity; IDA:UniProtKB.::GO:0030248; F:cellulose binding; IEA:InterPro. | | | | | | | | | | GO:0030245; P:cellulose catabolic process; IEA:UniProtKB-KW. |