Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL138C
Length:
1341
Number of sequences:
5887
Description:
YOL138C RTC1 SGDID:S000005498, Chr XV from 65350-61325, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SEA (Seh1-associated) complex, a coatomer-related complex that associates dynamically with the vacuole; null mutation suppresses cdc13-1 temperature sensitivity; has N-terminal WD-40 repeats and a C-terminal RING motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91A5DTX3    953   SEC31_LODEL Protein transport protein SEC31 O...2280.01     43.9     21     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
92A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...1600.011     43.9     22     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
93O15143    372   ARC1B_HUMAN Actin-related protein 2/3 complex...1810.011     43.5     26     42GO:0005885; C:Arp2/3 protein complex; TAS:ProtInc.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005200; F:structural constituent of cytoskeleton; TAS:ProtInc.
GO:0006928; P:cellular component movement; TAS:ProtInc.::GO:0030833; P:regulation of actin filament polymerization; IEA:InterPro.
94Q55CT5    1355   SEC31_DICDI Protein transport protein SEC31 O...1770.011     43.9     26     37GO:0030127; C:COPII vesicle coat; ISS:dictyBase.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:dictyBase.::GO:0006886; P:intracellular protein transport; ISS:dictyBase.::GO:0008380; P:RNA splicing; IEA:InterPro.
95Q5AAU3    1265   SEC31_CANAL Protein transport protein SEC31 O...2290.012     43.9     21     39GO:0015629; C:actin cytoskeleton; IEA:InterPro.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
96O22785    525   PR19B_ARATH Pre-mRNA-processing factor 19 hom...1920.018     43.1     23     42GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
97Q5F3X8    1227   SC31A_CHICK Protein transport protein Sec31A ...1870.021     43.1     25     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
98Q7S7N3    446   HAT2_NEUCR Histone acetyltransferase type B s...950.025     42.4     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
99P13712    422   MSI1_YEAST Chromatin assembly factor 1 subuni...1118.7     34.3     23     45GO:0033186; C:CAF-1 complex; IDA:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006335; P:DNA replication-dependent nucleosome assembly; IDA:SGD.
100Q9BQ67    446   GRWD1_HUMAN Glutamate-rich WD repeat-containi...1440.028     42.4     26     39GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
101Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...1440.028     42.4     26     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
102Q9XGN1    341   TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1...1940.029     42     20     37GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0009957; P:epidermal cell fate specification; IMP:TAIR.::GO:0032880; P:regulation of protein localization; IMP:TAIR.::GO:0009733; P:response to auxin stimulus; IEP:TAIR.::GO:0009723; P:response to ethylene stimulus; IEP:TAIR.::GO:0010026; P:trichome differentiation; IMP:TAIR.
103Q4P2E9    932   ERB1_USTMA Ribosome biogenesis protein ERB1 O...2200.029     42.4     25     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
104A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...1260.03     42.4     29     48GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
105P38328    384   ARPC1_YEAST Actin-related protein 2/3 complex...1430.03     42     27     45GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0005885; C:Arp2/3 protein complex; IDA:SGD.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0045010; P:actin nucleation; IDA:SGD.::GO:0000001; P:mitochondrion inheritance; TAS:SGD.
106Q9UM11    496   FZR_HUMAN Fizzy-related protein homolog OS=Ho...2000.031     42.4     24     41GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051488; P:activation of anaphase-promoting complex activity; IDA:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IDA:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0045732; P:positive regulation of protein catabolic process; IGI:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0070979; P:protein K11-linked ubiquitination; TAS:UniProtKB.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.
107P38968    1273   SEC31_YEAST Protein transport protein SEC31 O...2000.032     42.4     25     44GO:0030127; C:COPII vesicle coat; IDA:SGD.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0043332; C:mating projection tip; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0090114; P:COPII-coated vesicle budding; IDA:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
108A8WVX8    327   EIF3I_CAEBR Eukaryotic translation initiation...1870.032     41.6     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
109Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...1781.9     36.2     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
110A5DBG1    790   ERB1_PICGU Ribosome biogenesis protein ERB1 O...2250.033     42.4     26     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
111Q7ZV55    325   EIF3I_DANRE Eukaryotic translation initiation...1540.033     41.6     24     48GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
112Q4P553    485   HAT2_USTMA Histone acetyltransferase type B s...1000.034     42     24     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
113Q9R1K5    493   FZR_MOUSE Fizzy-related protein homolog OS=Mu...2000.036     42     24     41
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0070306; P:lens fiber cell differentiation; IMP:MGI.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090344; P:negative regulation of cell aging; IMP:BHF-UCL.::GO:0008284; P:positive regulation of cell proliferation; IMP:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; ISS:UniProtKB.::GO:0040020; P:regulation of meiosis; IDA:MGI.
114Q86Y13    1208   DZIP3_HUMAN E3 ubiquitin-protein ligase DZIP3...440.042     42     36     52GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0019902; F:phosphatase binding; IDA:UniProtKB.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.
115O24467    475   LE14B_PRUAR LEC14B homolog OS=Prunus armeniac...1530.044     41.6     27     41
116Q7TPV2    1204   DZIP3_MOUSE E3 ubiquitin-protein ligase DZIP3...440.051     42     36     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0019902; F:phosphatase binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
117O59894    376   PEX7_PICPA Peroxisomal targeting signal 2 rec...733.8     35.4     25     51GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
118O13985    512   YEG3_SCHPO Uncharacterized WD repeat-containi...1930.056     41.2     24     39GO:0033186; C:CAF-1 complex; IDA:PomBase.::GO:0016585; C:chromatin remodeling complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0006335; P:DNA replication-dependent nucleosome assembly; IC:PomBase.::GO:0070829; P:heterochromatin maintenance; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0090053; P:positive regulation of chromatin silencing at centromere; IMP:PomBase.::GO:0090055; P:positive regulation of chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:PomBase.::GO:0034504; P:protein localization to nucleus; IMP:PomBase.
119Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...633.5     35.8     32     52GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
120A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...2530.22     39.7     22     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
121O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...1640.061     41.2     24     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
records
Previous ‹‹ ›› Next Total records: 401 91 - 120
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::