Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL138C
Length:
1341
Number of sequences:
5887
Description:
YOL138C RTC1 SGDID:S000005498, Chr XV from 65350-61325, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SEA (Seh1-associated) complex, a coatomer-related complex that associates dynamically with the vacuole; null mutation suppresses cdc13-1 temperature sensitivity; has N-terminal WD-40 repeats and a C-terminal RING motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301A4RJV3    661   MDV1_MAGO7 Mitochondrial division protein 1 O...552.1     36.2     33     56GO:0030015; C:CCR4-NOT core complex; ISS:PAMGO_MGG.::GO:0005741; C:mitochondrial outer membrane; ISS:PAMGO_MGG.
GO:0051020; F:GTPase binding; ISS:PAMGO_MGG.
GO:0000266; P:mitochondrial fission; ISS:PAMGO_MGG.::GO:0000002; P:mitochondrial genome maintenance; ISS:PAMGO_MGG.::GO:0006402; P:mRNA catabolic process; ISS:PAMGO_MGG.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PAMGO_MGG.::GO:0006354; P:transcription elongation, DNA-dependent; ISS:PAMGO_MGG.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PAMGO_MGG.
302Q71UF4    425   RBBP7_RAT Histone-binding protein RBBP7 OS=Ra...613.3     35.4     31     44GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
303Q4R304    425   RBBP7_MACFA Histone-binding protein RBBP7 OS=...613.3     35.4     31     44GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
304Q16576    425   RBBP7_HUMAN Histone-binding protein RBBP7 OS=...613.3     35.4     31     44GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.::GO:0016581; C:NuRD complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0070370; P:cellular heat acclimation; IDA:UniProtKB.::GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:Reactome.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; TAS:ProtInc.::GO:0030308; P:negative regulation of cell growth; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
305Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...1782.1     36.2     25     45
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
306Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...2022.2     36.2     22     39
307P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...2632.2     36.2     22     39GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
308Q5EBE8    325   EIF3I_XENTR Eukaryotic translation initiation...1542.2     35.8     21     47GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
309P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...862.3     35.8     23     48
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
310P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...862.3     35.8     23     47
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
311Q60973    425   RBBP7_MOUSE Histone-binding protein RBBP7 OS=...613.2     35.4     31     44GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; TAS:MGI.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
312B0XFT7    328   EIF3I_CULQU Eukaryotic translation initiation...1632.3     35.8     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
313B6HP56    458   LIS11_PENCW Nuclear distribution protein nudF...2082.4     36.2     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
314Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...1122.5     35.8     23     42GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
315A8PT44    528   YTM1_MALGO Ribosome biogenesis protein YTM1 O...662.5     36.2     26     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
316Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...762.6     35.8     26     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
317Q9SJJ7    237   ATL57_ARATH RING-H2 finger protein ATL57 OS=A...462.6     35.4     33     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
318Q0CHM0    309   SEC13_ASPTN Protein transport protein sec13 O...1232.7     35.4     27     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
319Q05048    431   CSTF1_HUMAN Cleavage stimulation factor subun...372.7     35.8     38     70GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
320Q12363    437   WTM1_YEAST Transcriptional modulator WTM1 OS=...952.7     35.8     23     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0051457; P:maintenance of protein location in nucleus; IMP:SGD.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
321Q5APF0    466   YTM1_CANAL Ribosome biogenesis protein YTM1 O...932.9     35.8     30     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
322Q2GVT8    1258   SEC31_CHAGB Protein transport protein SEC31 O...1802.9     36.2     20     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
323Q6CGP9    532   PFS2_YARLI Polyadenylation factor subunit 2 O...583     35.8     34     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
324Q91VU6    549   DCA11_MOUSE DDB1- and CUL4-associated factor ...2183     35.8     23     38GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
325Q9C1X0    297   YN55_SCHPO Uncharacterized WD repeat-containi...663     35.4     33     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
326O00628    323   PEX7_HUMAN Peroxisomal targeting signal 2 rec...1113.1     35.4     26     45GO:0005777; C:peroxisome; IDA:UniProtKB.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:UniProtKB.
GO:0008611; P:ether lipid biosynthetic process; IMP:UniProtKB.::GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
327A7RM20    321   EIF3I_NEMVE Eukaryotic translation initiation...1503.1     35.4     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
328Q6NQ88    557   DDB2_ARATH Protein DAMAGED DNA-BINDING 2 OS=A...1053.2     35.8     25     45GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IMP:TAIR.::GO:0010224; P:response to UV-B; IEP:TAIR.
329Q96MR6    1250   WDR65_HUMAN WD repeat-containing protein 65 O...2023.2     35.8     25     42
330Q9JJ66    499   CDC20_MOUSE Cell division cycle protein 20 ho...2173.4     35.4     21     40GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; IDA:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; IDA:UniProtKB.::GO:0040020; P:regulation of meiosis; IGI:MGI.
331O74845    564   YCY9_SCHPO Uncharacterized WD repeat-containi...1513.4     35.8     21     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0034967; C:Set3 complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0016575; P:histone deacetylation; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:PomBase.
records
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