Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL138C
Length:
1341
Number of sequences:
5887
Description:
YOL138C RTC1 SGDID:S000005498, Chr XV from 65350-61325, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SEA (Seh1-associated) complex, a coatomer-related complex that associates dynamically with the vacuole; null mutation suppresses cdc13-1 temperature sensitivity; has N-terminal WD-40 repeats and a C-terminal RING motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...1581.2     36.6     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
272Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...1541.3     36.6     25     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
273Q9I8G9    424   RBBP7_CHICK Histone-binding protein RBBP7 OS=...1822.6     35.8     23     38GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:AgBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
274Q5B563    309   SEC13_EMENI Protein transport protein sec13 O...1231.3     36.6     26     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
275Q75AV4    449   PFS2_ASHGO Polyadenylation factor subunit 2 O...1251.3     37     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
276Q6C9N0    719   DSE1_YARLI Protein DSE1 OS=lipolytica). GN=DS...1281.3     37     28     42
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.
277Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...1283     35.4     24     41
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
278Q4V7B8    350   RNF44_RAT RING finger protein 44 OS=Rattus no...501.4     36.6     32     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
279P53024    289   SEC13_PICPG Protein transport protein SEC13 O...1251.4     36.6     26     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
280Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...711.4     36.6     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
281B5FZ19    325   EIF3I_TAEGU Eukaryotic translation initiation...1541.5     36.6     23     47GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
282P53699    684   CDC4_CANAX Cell division control protein 4 OS...441.5     37     48     59
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
283P87139    372   YDM9_SCHPO Uncharacterized RING finger protei...431.5     36.6     40     49GO:0000324; C:fungal-type vacuole; IDA:PomBase.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016567; P:protein ubiquitination; NAS:PomBase.
284Q6CT00    512   YD156_KLULA WD repeat-containing protein KLLA...1771.5     36.6     24     39
285O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...1061.5     36.6     25     45GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
286O94244    430   HAT2_SCHPO Histone acetyltransferase type B s...1821.5     36.6     24     37GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031511; C:Mis6-Sim4 complex; TAS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0051382; P:kinetochore assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0034501; P:protein localization to kinetochore; IGI:PomBase.::GO:0031066; P:regulation of histone deacetylation at centromere; IMP:PomBase.
287P27133    445   COROA_DICDI Coronin-A OS=Dictyostelium discoi...731.6     36.6     30     47GO:0042995; C:cell projection; IDA:dictyBase.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0007015; P:actin filament organization; ISS:dictyBase.::GO:0006928; P:cellular component movement; IMP:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0006972; P:hyperosmotic response; IEP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:dictyBase.::GO:0006909; P:phagocytosis; IEP:dictyBase.::GO:0009617; P:response to bacterium; IEP:dictyBase.
288A5DST9    491   YTM1_LODEL Ribosome biogenesis protein YTM1 O...721.6     36.6     32     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
289Q9DCE5    382   PK1IP_MOUSE p21-activated protein kinase-inte...1431.6     36.6     24     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
290Q4R6Y5    429   ZNRF4_MACFA Zinc/RING finger protein 4 OS=Mac...461.7     36.6     33     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
291A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...1291.8     36.2     26     39
292Q8YV57    1683   Y2124_NOSS1 Uncharacterized WD repeat-contain...2981.8     37     20     39
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
293Q9D180    1249   WDR65_MOUSE WD repeat-containing protein 65 O...2071.8     36.6     23     41
294Q3SWX8    425   RBBP7_BOVIN Histone-binding protein RBBP7 OS=...613     35.8     31     44GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
295Q3UHJ8    407   RNF44_MOUSE RING finger protein 44 OS=Mus mus...501.8     36.2     32     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
296Q99J09    342   MEP50_MOUSE Methylosome protein 50 OS=Mus mus...2161.9     36.2     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0060770; P:negative regulation of epithelial cell proliferation involved in prostate gland development; IMP:MGI.::GO:0008284; P:positive regulation of cell proliferation; IGI:MGI.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0060528; P:secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development; IMP:MGI.
297Q6CU59    444   YTM1_KLULA Ribosome biogenesis protein YTM1 O...1041.9     36.2     28     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
298P33750    489   DCA13_YEAST Protein SOF1 OS=Saccharomyces cer...1812     36.2     18     39GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
299Q5AZM3    1282   SEC31_EMENI Protein transport protein sec31 O...1822.1     36.6     21     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
300Q6BVZ3    504   PFS2_DEBHA Polyadenylation factor subunit 2 O...1232.1     36.2     26     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
301A4RJV3    661   MDV1_MAGO7 Mitochondrial division protein 1 O...552.1     36.2     33     56GO:0030015; C:CCR4-NOT core complex; ISS:PAMGO_MGG.::GO:0005741; C:mitochondrial outer membrane; ISS:PAMGO_MGG.
GO:0051020; F:GTPase binding; ISS:PAMGO_MGG.
GO:0000266; P:mitochondrial fission; ISS:PAMGO_MGG.::GO:0000002; P:mitochondrial genome maintenance; ISS:PAMGO_MGG.::GO:0006402; P:mRNA catabolic process; ISS:PAMGO_MGG.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PAMGO_MGG.::GO:0006354; P:transcription elongation, DNA-dependent; ISS:PAMGO_MGG.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PAMGO_MGG.
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