UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YOL138C

Length:

1341

Number of sequences:

5887

Description:

YOL138C RTC1 SGDID:S000005498, Chr XV from 65350-61325, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SEA (Seh1-associated) complex, a coatomer-related complex that associates dynamically with the vacuole; null mutation suppresses cdc13-1 temperature sensitivity; has N-terminal WD-40 repeats and a C-terminal RING motif"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
151	Q03897	1148	WDR59_YEAST Maintenance of telomere capping p...	104	6.1	35	28	48	GO:0097042; C:extrinsic to fungal-type vacuolar membrane; IDA:SGD.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
152	P49846	704	TAF5_DROME Transcription initiation factor TF...	128	0.15	40	27	42	GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
									GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
153	Q551B5	1119	MIO_DICDI WD repeat-containing protein mio OS...	160	0.15	40	25	45
									GO:0005488; F:binding; IEA:InterPro.
154	A3LXF0	809	ERB1_PICST Ribosome biogenesis protein ERB1 O...	228	0.16	40	24	41	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
155	O75529	589	TAF5L_HUMAN TAF5-like RNA polymerase II p300/...	203	0.16	40	26	39	GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
									GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
									GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
156	Q24371	769	L2DTL_DROME Protein lethal(2)denticleless OS=...	41	0.17	40	37	59	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
157	Q5XI13	445	GRWD1_RAT Glutamate-rich WD repeat-containing...	148	0.17	39.7	23	35	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
158	Q922V4	513	PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus mu...	101	0.18	39.7	24	48	GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
159	Q29RH4	351	THOC3_BOVIN THO complex subunit 3 OS=Bos taur...	167	0.19	39.3	22	43	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
160	Q4P9P9	453	LIS1_USTMA Nuclear distribution protein PAC1 ...	372	0.2	39.7	20	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
161	Q8VE80	351	THOC3_MOUSE THO complex subunit 3 OS=Mus musc...	167	0.2	39.3	22	43
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
162	Q6BK34	415	HAT2_DEBHA Histone acetyltransferase type B s...	73	0.21	39.3	30	58	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
163	P49695	742	PKWA_THECU Probable serine/threonine-protein ...	160	0.21	39.7	23	41
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
164	A8PTE4	674	MDV1_MALGO Mitochondrial division protein 1 O...	174	0.21	39.7	23	38	GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
165	Q2UF60	1273	SEC31_ASPOR Protein transport protein sec31 O...	241	0.22	39.7	20	40	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
									GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
166	Q96J01	351	THOC3_HUMAN THO complex subunit 3 OS=Homo sap...	167	0.23	39.3	22	43	GO:0000346; C:transcription export complex; IDA:UniProtKB.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
167	Q5DFU0	352	CIAO1_SCHJA Probable cytosolic iron-sulfur pr...	142	0.23	39.3	27	43
									GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
168	Q8H0T9	837	KTNB1_ARATH Katanin p80 WD40 repeat-containin...	78	0.23	39.7	28	49	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
									GO:0005515; F:protein binding; IPI:TAIR.
169	P38129	798	TAF5_YEAST Transcription initiation factor TF...	153	0.23	39.7	23	42	GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.::GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
									GO:0003682; F:chromatin binding; IDA:SGD.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IMP:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
									GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IC:SGD.
170	Q9NYS7	404	WSB2_HUMAN WD repeat and SOCS box-containing ...	185	0.24	39.3	25	41
									GO:0035556; P:intracellular signal transduction; IEA:InterPro.
171	O54929	404	WSB2_MOUSE WD repeat and SOCS box-containing ...	185	0.24	39.3	25	41
									GO:0035556; P:intracellular signal transduction; IEA:InterPro.
172	P0CS47	713	PFS2_CRYNB Polyadenylation factor subunit 2 O...	57	5.1	35	28	51	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
173	P0CS46	712	PFS2_CRYNJ Polyadenylation factor subunit 2 O...	57	5.1	35	28	51	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
174	A5DHD9	290	SEC13_PICGU Protein transport protein SEC13 O...	178	0.24	38.9	22	40	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
175	Q5RF51	357	SNR40_PONAB U5 small nuclear ribonucleoprotei...	130	0.5	38.1	28	44	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
176	Q6FJS0	455	PFS2_CANGA Polyadenylation factor subunit 2 O...	145	0.28	38.9	25	39	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
177	Q4X1Y0	510	PFS2_ASPFU Polyadenylation factor subunit 2 O...	233	6.5	34.7	23	39	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
178	A2CEH0	490	POC1B_DANRE POC1 centriolar protein homolog B...	171	0.56	38.1	22	39
									GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0060287; P:epithelial cilium movement involved in determination of left/right asymmetry; IMP:ZFIN.::GO:0003014; P:renal system process; IMP:ZFIN.
179	Q0V8J1	406	WSB2_BOVIN WD repeat and SOCS box-containing ...	185	0.29	38.9	26	40
									GO:0035556; P:intracellular signal transduction; IEA:InterPro.
180	P57737	925	CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...	146	0.3	39.3	23	41	GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
181	O22469	424	MSI3_ARATH WD-40 repeat-containing protein MS...	178	1.1	37	25	42	GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.

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