Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL138C
Length:
1341
Number of sequences:
5887
Description:
YOL138C RTC1 SGDID:S000005498, Chr XV from 65350-61325, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SEA (Seh1-associated) complex, a coatomer-related complex that associates dynamically with the vacuole; null mutation suppresses cdc13-1 temperature sensitivity; has N-terminal WD-40 repeats and a C-terminal RING motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...1640.061     41.2     24     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
122P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...2530.24     39.7     22     39GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
123Q0UYV9    519   YD156_PHANO WD repeat-containing protein SNOG...1760.062     41.2     24     41
124P49177    377   GBB_ARATH Guanine nucleotide-binding protein ...1870.064     40.8     22     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005783; C:endoplasmic reticulum; IDA:TAIR.::GO:0005834; C:heterotrimeric G-protein complex; IPI:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009817; P:defense response to fungus, incompatible interaction; IMP:TAIR.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0048527; P:lateral root development; IMP:TAIR.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0009887; P:organ morphogenesis; IMP:TAIR.::GO:0072593; P:reactive oxygen species metabolic process; IMP:TAIR.::GO:0009723; P:response to ethylene stimulus; IMP:TAIR.::GO:0009845; P:seed germination; IEP:UniProtKB.
125O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...1410.26     38.9     23     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
126Q965S8    327   EIF3I_CAEEL Eukaryotic translation initiation...1740.069     40.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
127P53011    349   SEH1_YEAST Nucleoporin SEH1 OS=Saccharomyces ...2030.07     40.8     24     40GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0031080; C:Nup107-160 complex; IDA:SGD.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006406; P:mRNA export from nucleus; TAS:SGD.::GO:0006609; P:mRNA-binding (hnRNP) protein import into nucleus; TAS:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:SGD.::GO:0006999; P:nuclear pore organization; TAS:SGD.::GO:0006611; P:protein export from nucleus; TAS:SGD.::GO:0006610; P:ribosomal protein import into nucleus; TAS:SGD.::GO:0006407; P:rRNA export from nucleus; TAS:SGD.::GO:0006408; P:snRNA export from nucleus; TAS:SGD.::GO:0006608; P:snRNP protein import into nucleus; TAS:SGD.::GO:0006409; P:tRNA export from nucleus; TAS:SGD.
128Q75C99    423   HAT2_ASHGO Histone acetyltransferase type B s...1110.074     40.8     29     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
129Q5ZIU8    657   KTNB1_CHICK Katanin p80 WD40-containing subun...1710.074     41.2     20     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
130Q75DC2    328   ASR1_ASHGO Alcohol-sensitive RING finger prot...410.081     40.4     37     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
131A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...1511.4     37     23     38GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
132Q54WA3    316   PEX7_DICDI Peroxisomal targeting signal 2 rec...730.084     40.4     33     56GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
133Q6C7Q4    452   HAT2_YARLI Histone acetyltransferase type B s...2053.6     35.4     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
134Q54ED4    482   GRWD1_DICDI Glutamate-rich WD repeat-containi...1720.26     39.3     25     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
135Q2H139    657   MDV1_CHAGB Mitochondrial division protein 1 O...1280.2     39.7     21     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
136Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...1550.089     40.8     25     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
137A5DWF4    874   ERB1_LODEL Ribosome biogenesis protein ERB1 O...2300.094     40.8     25     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
138P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...1720.1     40.4     26     42
139Q8TDJ6    3036   DMXL2_HUMAN DmX-like protein 2 OS=Homo sapien...1780.11     40.8     23     42GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0030672; C:synaptic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0017137; F:Rab GTPase binding; IDA:MGI.
140Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...1550.11     40.4     23     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
141Q8BHD1    476   POC1B_MOUSE POC1 centriolar protein homolog B...2780.12     40.4     23     41GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
142Q810D6    446   GRWD1_MOUSE Glutamate-rich WD repeat-containi...1440.12     40.4     25     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
143Q9WUC8    514   PLRG1_RAT Pleiotropic regulator 1 OS=Rattus n...1010.12     40.4     24     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
144Q2UG43    294   SEC13_ASPOR Protein transport protein sec13 O...1230.12     39.7     28     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
145Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...1010.12     40.4     24     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
146O43660    514   PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo s...1010.13     40     24     48GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
147A4RD35    1269   SEC31_MAGO7 Protein transport protein SEC31 O...1820.13     40.4     20     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
148P53851    422   TEX1_YEAST Protein TEX1 OS=Saccharomyces cere...1750.13     40     26     43GO:0000346; C:transcription export complex; IPI:SGD.
GO:0006406; P:mRNA export from nucleus; IC:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
149Q32LP9    525   COR2A_BOVIN Coronin-2A OS=Bos taurus (Bovine)...850.14     40     29     49GO:0015629; C:actin cytoskeleton; ISS:RefGenome.::GO:0017053; C:transcriptional repressor complex; ISS:RefGenome.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0030036; P:actin cytoskeleton organization; ISS:RefGenome.
150Q9D2V7    922   CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...1360.14     40.4     24     43GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
151Q03897    1148   WDR59_YEAST Maintenance of telomere capping p...1046.1     35     28     48GO:0097042; C:extrinsic to fungal-type vacuolar membrane; IDA:SGD.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
records
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