Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL103W-B
Length:
1755
Number of sequences:
5887
Description:
YOL103W-B YOL103W-B SGDID:S000007350, Chr XV from 118000-119304,119306-123268, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4380     886     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4380     886     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4350     885     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64Q12441    440   YD12A_YEAST Transposon Ty1-DR3 Gag polyprotei...4380     884     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4380     883     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4380     883     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4380     883     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4380     882     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69Q12485    440   YG12A_YEAST Transposon Ty1-GR2 Gag polyprotei...4350     879     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4350     878     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4380     876     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4380     875     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4380     875     97     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4760     862     90     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4380     853     95     96GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4350     750     84     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4350     687     78     85GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4350     685     78     85GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4350     680     78     84GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80P25383    438   YC21A_YEAST Transposon Ty2-C Gag polyprotein ...4352e-126     409     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
81Q99303    438   YD23A_YEAST Transposon Ty2-DR3 Gag polyprotei...4356e-126     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82P0C2J6    438   YL22A_YEAST Transposon Ty2-LR2 Gag polyprotei...4351e-125     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
83Q12260    438   YB21A_YEAST Transposon Ty2-B Gag polyprotein ...4352e-125     406     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84Q12439    438   YO21A_YEAST Transposon Ty2-OR1 Gag polyprotei...4353e-125     405     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
85Q03483    438   YD22A_YEAST Transposon Ty2-DR2 Gag polyprotei...4354e-125     405     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86Q12293    438   YO22A_YEAST Transposon Ty2-OR2 Gag polyprotei...4352e-124     403     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87P0CX62    438   YG22A_YEAST Transposon Ty2-GR2 Gag polyprotei...4352e-124     403     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88P0CX61    438   YF21A_YEAST Transposon Ty2-F Gag polyprotein ...4352e-124     403     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89P0C2J4    438   YL21A_YEAST Transposon Ty2-LR1 Gag polyprotei...4352e-124     403     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90Q12392    438   YD21A_YEAST Transposon Ty2-DR1 Gag polyprotei...4363e-124     403     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91P0C2J2    438   YG21A_YEAST Transposon Ty2-GR1 Gag polyprotei...4353e-124     402     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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