Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL090W
Length:
964
Number of sequences:
5887
Description:
YOL090W MSH2 SGDID:S000005450, Chr XV from 147382-150276, Genome Release 64-1-1, Verified ORF, "Protein that forms heterodimers with Msh3p and Msh6p that bind to DNA mismatches to initiate the mismatch repair process; contains a Walker ATP-binding motif required for repair activity; Msh2p-Msh6p binds to and hydrolyzes ATP"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q9SMV7    1109   MSH7_ARATH DNA mismatch repair protein Msh6-2...3120.000000001     66.2     23     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
632C5CTL8    885   MUTS_VARPS DNA mismatch repair protein MutS O...5566e-51     197     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
633Q7SD11    1145   MSH3_NEUCR DNA mismatch repair protein msh-3 ...6141e-49     195     26     47GO:0032302; C:MutSbeta complex; IBA:RefGenome.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000406; F:double-strand/single-strand DNA junction binding; IBA:RefGenome.::GO:0000404; F:loop DNA binding; IBA:RefGenome.::GO:0000403; F:Y-form DNA binding; IBA:RefGenome.
GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0000735; P:removal of nonhomologous ends; IBA:RefGenome.
634B5EA63    837   MUTS_GEOBB DNA mismatch repair protein MutS O...5632e-49     192     27     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
635Q2HFD4    1156   MSH3_CHAGB DNA mismatch repair protein MSH3 O...3206e-49     192     35     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
636Q6CSR1    1029   MSH3_KLULA DNA mismatch repair protein MSH3 O...6476e-49     192     27     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
637A4R0R0    1151   MSH3_MAGO7 DNA mismatch repair protein MSH3 O...6017e-49     192     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
638O04716    1324   MSH6_ARATH DNA mismatch repair protein Msh6-1...1200.00001     53.5     30     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IDA:TAIR.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; ISS:TAIR.::GO:0006290; P:pyrimidine dimer repair; IMP:TAIR.
639O15457    936   MSH4_HUMAN MutS protein homolog 4 OS=Homo sap...5712e-48     190     29     46GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
640P0CO92    1191   MSH3_CRYNJ DNA mismatch repair protein MSH3 O...5975e-47     186     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
641P0CO93    1191   MSH3_CRYNB DNA mismatch repair protein MSH3 O...5975e-47     186     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
642A5DEV6    960   MSH3_PICGU DNA mismatch repair protein MSH3 O...2090.029     42     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
643A1TNU7    890   MUTS_ACIAC DNA mismatch repair protein MutS O...2373e-46     182     40     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
644Q99MT2    958   MSH4_MOUSE MutS protein homolog 4 OS=Mus musc...6091e-45     182     27     46GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000795; C:synaptonemal complex; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0007292; P:female gamete generation; IMP:MGI.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0001541; P:ovarian follicle development; IMP:MGI.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0007283; P:spermatogenesis; IMP:MGI.
645Q6FVN6    1025   MSH3_CANGA DNA mismatch repair protein MSH3 O...770.045     41.6     32     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
646P25846    959   MSH1_YEAST DNA mismatch repair protein MSH1, ...6602e-45     181     26     46GO:0032300; C:mismatch repair complex; IBA:RefGenome.::GO:0005739; C:mitochondrion; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0032139; F:dinucleotide insertion or deletion binding; IDA:SGD.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0032137; F:guanine/thymine mispair binding; IDA:SGD.
GO:0006298; P:mismatch repair; IMP:SGD.::GO:0043504; P:mitochondrial DNA repair; IMP:SGD.
647Q6CHE5    990   MSH3_YARLI DNA mismatch repair protein MSH3 O...6163e-44     177     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
648Q9VUM0    1190   MSH6_DROME Probable DNA mismatch repair prote...6026e-44     177     26     45GO:0032301; C:MutSalpha complex; IBA:RefGenome.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000400; F:four-way junction DNA binding; IBA:RefGenome.::GO:0032137; F:guanine/thymine mispair binding; IBA:RefGenome.::GO:0032138; F:single base insertion or deletion binding; IBA:RefGenome.
GO:0008630; P:DNA damage response, signal transduction resulting in induction of apoptosis; IBA:RefGenome.::GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IMP:FlyBase.::GO:0045910; P:negative regulation of DNA recombination; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0009411; P:response to UV; IBA:RefGenome.
649Q59Y41    1037   MSH3_CANAL DNA mismatch repair protein MSH3 O...2437e-44     176     40     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
650A5DYV8    993   MSH3_LODEL DNA mismatch repair protein MSH3 O...990.0001     49.7     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
651O43196    834   MSH5_HUMAN MutS protein homolog 5 OS=Homo sap...5813e-42     170     26     46GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0007136; P:meiotic prophase II; TAS:ProtInc.::GO:0006298; P:mismatch repair; TAS:ProtInc.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
652A3LU10    1025   MSH3_PICST DNA mismatch repair protein MSH3 O...2605e-42     170     35     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
653Q9QUM7    833   MSH5_MOUSE MutS protein homolog 5 OS=Mus musc...5857e-41     166     25     47GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000795; C:synaptonemal complex; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0007292; P:female gamete generation; IMP:MGI.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
654Q6MG62    831   MSH5_RAT MutS protein homolog 5 OS=Rattus nor...5642e-39     162     25     46GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
655Q23405    842   HIM14_CAEEL MutS protein homolog him-14 OS=Ca...5823e-37     155     26     45GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0045143; P:homologous chromosome segregation; IMP:WormBase.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0000239; P:pachytene; IMP:UniProtKB.::GO:0000712; P:resolution of meiotic recombination intermediates; IMP:UniProtKB.
656Q12175    901   MSH5_YEAST MutS protein homolog 5 OS=Saccharo...2620.00002     52.4     23     43GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
657O94065    803   MSH4_CANAX MutS protein homolog 4 OS=Candida ...1227.8     33.9     26     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006298; P:mismatch repair; IEA:InterPro.
658Q19272    1369   MSH5_CAEEL MutS protein homolog 5 OS=Caenorha...6089e-31     135     23     42GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0045143; P:homologous chromosome segregation; IMP:WormBase.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:UniProtKB.
659Q65GE2    785   MUTS2_BACLD MutS2 protein OS=Bacillus licheni...3162e-26     119     28     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0045005; P:maintenance of fidelity involved in DNA-dependent DNA replication; IEA:InterPro.::GO:0006298; P:mismatch repair; IEA:InterPro.
660P40965    878   MSH4_YEAST MutS protein homolog 4 OS=Saccharo...6012e-25     117     24     45GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
661Q03R49    787   MUTS2_LACBA MutS2 protein OS=Lactobacillus br...2662e-25     116     30     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0045005; P:maintenance of fidelity involved in DNA-dependent DNA replication; IEA:InterPro.::GO:0006298; P:mismatch repair; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 833 631 - 660
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::