Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL080C
Length:
289
Number of sequences:
5887
Description:
YOL080C REX4 SGDID:S000005440, Chr XV from 181427-180558, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative RNA exonuclease possibly involved in pre-rRNA processing and ribosome assembly"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08237    289   REXO4_YEAST RNA exonuclease 4 OS=Saccharomyce...2890     592     100     100GO:0005730; C:nucleolus; IDA:SGD.
GO:0008408; F:3'-5' exonuclease activity; ISS:SGD.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0000027; P:ribosomal large subunit assembly; IGI:SGD.::GO:0006364; P:rRNA processing; IGI:SGD.
2Q6CMT3    294   REXO4_KLULA RNA exonuclease 4 OS=1267 / NRRL ...2911e-106     318     55     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
3Q6FQA0    263   REXO4_CANGA RNA exonuclease 4 OS=NRRL Y-65) (...2893e-103     308     56     72GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
4Q757I9    285   REXO4_ASHGO RNA exonuclease 4 OS=Y-1056) (Yea...2962e-91     279     48     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
5Q6BIK6    272   REXO4_DEBHA RNA exonuclease 4 OS=0083 / IGC 2...2562e-82     256     53     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
6Q5A3Q0    285   REXO4_CANAL RNA exonuclease 4 OS=Candida albi...1962e-68     220     54     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
7Q4WHF8    310   REXO4_ASPFU RNA exonuclease 4 OS=A1100) (Aspe...1838e-66     214     56     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
8Q4IEV5    319   REXO4_GIBZE RNA exonuclease 4 OS=(Wheat head ...3061e-65     214     42     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
9O94375    260   REXO4_SCHPO RNA exonuclease 4 OS=Schizosaccha...1666e-63     205     58     77GO:0005730; C:nucleolus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; ISS:PomBase.
10Q6CE69    291   REXO4_YARLI RNA exonuclease 4 OS=lipolytica)....2913e-62     204     41     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
11Q4PER6    375   REXO4_USTMA RNA exonuclease 4 OS=Ustilago may...1867e-60     201     52     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
12Q7S9B7    406   REXO4_NEUCR RNA exonuclease 4 OS=1257 / FGSC ...1792e-55     190     50     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
13P0CQ44    408   REXO4_CRYNJ RNA exonuclease 4 OS=ATCC MYA-565...1715e-55     189     51     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
14P0CQ45    408   REXO4_CRYNB RNA exonuclease 4 OS=(Filobasidie...1715e-55     189     51     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
15Q6DEW6    414   REXO4_XENTR RNA exonuclease 4 OS=Xenopus trop...1648e-51     178     51     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
16Q91560    421   REXO4_XENLA RNA exonuclease 4 OS=Xenopus laev...1641e-50     178     51     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
17Q6PAQ4    432   REXO4_MOUSE RNA exonuclease 4 OS=Mus musculus...1644e-50     177     51     72GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
18Q9GZR2    422   REXO4_HUMAN RNA exonuclease 4 OS=Homo sapiens...1673e-49     174     48     71GO:0005730; C:nucleolus; IDA:LIFEdb.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
19Q2YDK1    349   I20L2_BOVIN Interferon-stimulated 20 kDa exon...1716e-44     158     51     67GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
20Q3U1G5    368   I20L2_MOUSE Interferon-stimulated 20 kDa exon...1717e-43     155     50     66GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
21Q9H9L3    353   I20L2_HUMAN Interferon-stimulated 20 kDa exon...1694e-42     154     51     67GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
22Q6AXU3    369   I20L2_RAT Interferon-stimulated 20 kDa exonuc...1701e-41     153     49     67GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
23Q5REE2    325   AEN_PONAB Apoptosis-enhancing nuclease OS=Pon...1688e-36     136     43     64GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0004527; F:exonuclease activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
24Q8WTP8    325   AEN_HUMAN Apoptosis-enhancing nuclease OS=Hom...1681e-35     135     42     65GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0004527; F:exonuclease activity; IDA:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; IDA:UniProtKB.::GO:0010212; P:response to ionizing radiation; IDA:UniProtKB.
25B2GUW6    332   AEN_RAT Apoptosis-enhancing nuclease OS=Rattu...1702e-35     135     43     65GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0004527; F:exonuclease activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
26Q9CZI9    336   AEN_MOUSE Apoptosis-enhancing nuclease OS=Mus...1703e-34     132     42     64GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0004527; F:exonuclease activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
27Q96AZ6    181   ISG20_HUMAN Interferon-stimulated gene 20 kDa...1675e-32     122     43     62GO:0016605; C:PML body; IDA:UniProtKB.
GO:0000175; F:3'-5'-exoribonuclease activity; IDA:UniProtKB.::GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008310; F:single-stranded DNA specific 3'-5' exodeoxyribonuclease activity; IDA:UniProtKB.
GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0000738; P:DNA catabolic process, exonucleolytic; IDA:UniProtKB.::GO:0009615; P:response to virus; IDA:UniProtKB.::GO:0006401; P:RNA catabolic process; IDA:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0060337; P:type I interferon-mediated signaling pathway; TAS:Reactome.
28Q66UW5    181   ISG20_PIG Interferon-stimulated gene 20 kDa p...1675e-31     119     42     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
29Q9JL16    300   ISG20_MOUSE Interferon-stimulated gene 20 kDa...1547e-24     102     37     60
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
30P53331    553   REXO1_YEAST RNA exonuclease 1 OS=Saccharomyce...1603e-19     91.3     39     56GO:0005634; C:nucleus; IDA:SGD.
GO:0000175; F:3'-5'-exoribonuclease activity; IMP:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0002107; P:generation of mature 3'-end of 5S rRNA generated by RNA polymerase III; IMP:SGD.::GO:0034415; P:tRNA 3'-trailer cleavage, exonucleolytic; IMP:SGD.
31A3KPE8    409   SDN1_ARATH Small RNA degrading nuclease 1 OS=...1731e-18     88.2     36     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IDA:TAIR.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0010587; P:miRNA catabolic process; IDA:TAIR.
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