Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL077C
Length:
291
Number of sequences:
5887
Description:
YOL077C BRX1 SGDID:S000005437, Chr XV from 186723-185848, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein, constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08235    291   BRX1_YEAST Ribosome biogenesis protein BRX1 O...2910     603     100     100GO:0005730; C:nucleolus; IPI:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0008097; F:5S rRNA binding; IPI:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0042134; F:rRNA primary transcript binding; IPI:SGD.
GO:0000027; P:ribosomal large subunit assembly; IPI:SGD.
2Q9HGL6    295   BRX1_SCHPO Ribosome biogenesis protein brx1 O...2583e-109     325     57     77GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
3Q8UVY2    339   BRX1_XENLA Ribosome biogenesis protein BRX1 h...2677e-91     280     49     67GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
4Q3SZZ0    353   BRX1_BOVIN Ribosome biogenesis protein BRX1 h...2632e-88     274     48     69GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
5Q9DCA5    353   BRX1_MOUSE Ribosome biogenesis protein BRX1 h...2633e-88     273     48     68GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
6Q8TDN6    353   BRX1_HUMAN Ribosome biogenesis protein BRX1 h...2636e-88     273     48     69GO:0005730; C:nucleolus; IDA:HPA.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
7Q4QQT6    352   BRX1_RAT Ribosome biogenesis protein BRX1 hom...2637e-87     270     47     68GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
8Q5RAN2    353   BRX1_PONAB Ribosome biogenesis protein BRX1 h...2632e-86     269     47     68GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
9Q9VZE6    359   BRX1_DROME Ribosome biogenesis protein BRX1 h...2731e-76     244     42     64GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
10P34524    352   BRX1_CAEEL Ribosome biogenesis protein BRX1 h...2343e-72     232     44     67GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007276; P:gamete generation; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
11Q54JN0    326   BRX1_DICDI Ribosome biogenesis protein BRX1 h...2625e-72     231     44     60GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0042134; F:rRNA primary transcript binding; ISS:dictyBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:dictyBase.
12Q755T8    283   IMP4_ASHGO U3 small nucleolar ribonucleoprote...1330.002     42.4     28     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
13Q9H7B2    306   RPF2_HUMAN Ribosome production factor 2 homol...1210.016     40     26     50GO:0005730; C:nucleolus; IDA:HPA.
14Q6C804    283   IMP4_YARLI U3 small nucleolar ribonucleoprote...1230.022     39.3     30     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
15Q6BYD9    284   IMP4_DEBHA U3 small nucleolar ribonucleoprote...1230.024     39.3     31     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
16O13823    289   IMP4_SCHPO U3 small nucleolar ribonucleoprote...1990.025     39.3     24     45GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
17Q9JJ80    306   RPF2_MOUSE Ribosome production factor 2 homol...1210.026     39.3     24     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
18O14206    389   YDD3_SCHPO Brix domain-containing protein C1B...720.034     38.9     36     57GO:0005730; C:nucleolus; IDA:PomBase.
GO:0019843; F:rRNA binding; ISS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
19Q2YDN6    306   RPF2_BOVIN Ribosome production factor 2 homol...660.079     37.7     27     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
20Q9VDE5    460   PPAN_DROME Protein Peter pan OS=Drosophila me...470.2     36.6     38     55
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007444; P:imaginal disc development; IMP:UniProtKB.::GO:0002164; P:larval development; IMP:UniProtKB.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.
21O14180    306   YDS4_SCHPO Brix domain-containing protein C4F...1710.35     35.8     22     40GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0042134; F:rRNA primary transcript binding; ISS:PomBase.
GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
22P53941    290   IMP4_YEAST U3 small nucleolar ribonucleoprote...1330.73     34.7     26     46GO:0034457; C:Mpp10 complex; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0042134; F:rRNA primary transcript binding; IPI:SGD.::GO:0043047; F:single-stranded telomeric DNA binding; IDA:SGD.::GO:0030515; F:snoRNA binding; IDA:SGD.
GO:0006364; P:rRNA processing; TAS:SGD.
23Q54DJ0    307   RPF2_DICDI Ribosome production factor 2 homol...1151.4     33.9     25     44GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0019843; F:rRNA binding; ISS:dictyBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:dictyBase.
24Q2GJB4    197   CLPP_ANAPZ ATP-dependent Clp protease proteol...565.7     31.6     36     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
25A7HCD6    377   RLMN_ANADF Ribosomal RNA large subunit methyl...286.8     32     50     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:EC.
26Q9ZCT7    550   CH60_RICPR 60 kDa chaperonin OS=Rickettsia pr...848.9     31.6     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0042026; P:protein refolding; IEA:InterPro.
27Q9VKB4    394   RPF1_DROME Probable ribosome production facto...1849.3     31.6     21     41GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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