Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL072W
Length:
455
Number of sequences:
5887
Description:
YOL072W THP1 SGDID:S000005433, Chr XV from 194970-196337, Genome Release 64-1-1, Verified ORF, "Nuclear pore-associated protein; component of TREX-2 complex (Sac3p-Thp1p-Sus1p-Cdc31p) involved in transcription elongation and mRNA export from the nucleus; involved in post-transcriptional tethering of active genes to the nuclear periphery and to non-nascent mRNP; contains a PAM domain implicated in protein-protein binding"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08231    455   THP1_YEAST Nuclear mRNA export protein THP1 O...4550     939     100     100GO:0005643; C:nuclear pore; IDA:SGD.::GO:0070390; C:transcription export complex 2; IDA:SGD.
GO:0003690; F:double-stranded DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.
GO:0000282; P:cellular bud site selection; IMP:SGD.::GO:0031124; P:mRNA 3'-end processing; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0071033; P:nuclear retention of pre-mRNA at the site of transcription; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
2Q5U3P0    399   PCID2_DANRE PCI domain-containing protein 2 O...2680.00000000002     68.9     26     46
3Q5FWP8    399   PCID2_XENLA PCI domain-containing protein 2 O...1760.00000000004     68.2     27     51
4Q5JVF3    399   PCID2_HUMAN PCI domain-containing protein 2 O...1760.00000000004     68.2     27     51
GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:2000117; P:negative regulation of cysteine-type endopeptidase activity; IMP:UniProtKB.::GO:0090267; P:positive regulation of mitotic cell cycle spindle assembly checkpoint; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0043488; P:regulation of mRNA stability; IMP:UniProtKB.::GO:0048536; P:spleen development; ISS:UniProtKB.
5Q2TBN6    408   PCID2_BOVIN PCI domain-containing protein 2 O...1810.00000000007     67.4     28     51
GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:2000117; P:negative regulation of cysteine-type endopeptidase activity; ISS:UniProtKB.::GO:0090267; P:positive regulation of mitotic cell cycle spindle assembly checkpoint; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0048536; P:spleen development; ISS:UniProtKB.
6Q95QU0    413   PCID2_CAEEL PCI domain-containing protein 2 h...2300.0000000001     67     27     45
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
7Q8BFV2    399   PCID2_MOUSE PCI domain-containing protein 2 O...1760.0000000001     66.6     29     51
GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0045579; P:positive regulation of B cell differentiation; IMP:UniProtKB.::GO:0090267; P:positive regulation of mitotic cell cycle spindle assembly checkpoint; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0048536; P:spleen development; IMP:UniProtKB.
8Q54PX7    430   PCID2_DICDI PCI domain-containing protein 2 h...2040.0000000002     66.2     27     47
9Q9Y820    442   YON7_SCHPO PCI domain-containing protein C110...4050.0000000009     63.9     23     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005643; C:nuclear pore; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0000346; C:transcription export complex; ISS:PomBase.
GO:0003690; F:double-stranded DNA binding; ISS:PomBase.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006406; P:mRNA export from nucleus; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
10Q60YJ7    413   PCID2_CAEBR PCI domain-containing protein 2 h...2520.000000007     61.2     27     44
11Q9VTL1    395   PCID2_DROME PCI domain-containing protein 2 h...2330.00000001     60.5     26     41GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005844; C:polysome; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006406; P:mRNA export from nucleus; IDA:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
12Q4P8T5    454   CSN12_USTMA Protein CSN12 homolog OS=Ustilago...1760.000005     52.4     26     41
13O13873    423   CSN12_SCHPO Protein CSN12 homolog OS=Schizosa...2440.00003     49.7     24     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0000338; P:protein deneddylation; IC:PomBase.
14Q6CPB1    424   CSN12_KLULA COP9 signalosome complex subunit ...2140.0002     47.4     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
15Q7SD63    461   CSN12_NEUCR Protein CSN12 homolog OS=1257 / F...2250.006     42.7     21     40
16P0CR48    403   CSN12_CRYNJ Protein CSN12 homolog OS=ATCC MYA...1650.09     38.9     24     39
17P0CR49    403   CSN12_CRYNB Protein CSN12 homolog OS=(Filobas...1650.09     38.9     24     39
18Q9UQ49    428   NEUR3_HUMAN Sialidase-3 OS=Homo sapiens (Huma...396.9     32.7     33     59GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
GO:0052794; F:exo-alpha-(2->3)-sialidase activity; IEA:EC.::GO:0052795; F:exo-alpha-(2->6)-sialidase activity; IEA:EC.::GO:0052796; F:exo-alpha-(2->8)-sialidase activity; IEA:EC.
GO:0005975; P:carbohydrate metabolic process; IDA:MGI.::GO:0006689; P:ganglioside catabolic process; TAS:ProtInc.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
19P41540    115   TKN1_RABIT Protachykinin-1 OS=Oryctolagus cun...886.9     31.2     28     43GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0007218; P:neuropeptide signaling pathway; IEA:UniProtKB-KW.::GO:0007268; P:synaptic transmission; IEA:UniProtKB-KW.::GO:0007217; P:tachykinin receptor signaling pathway; IEA:InterPro.
records
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