Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL067C
Length:
177
Number of sequences:
5887
Description:
YOL067C RTG1 SGDID:S000005428, Chr XV from 202518-201985, Genome Release 64-1-1, reverse complement, Verified ORF, "Transcription factor (bHLH) involved in interorganelle communication between mitochondria, peroxisomes, and nucleus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32607    177   RTG1_YEAST Retrograde regulation protein 1 OS...1773e-127     362     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; IDA:SGD.
GO:0071400; P:cellular response to oleic acid; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IDA:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.
2Q08874    526   MITF_MOUSE Microphthalmia-associated transcri...920.054     37.4     33     46GO:0005634; C:nucleus; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0046849; P:bone remodeling; IMP:MGI.::GO:0043010; P:camera-type eye development; IGI:MGI.::GO:0045165; P:cell fate commitment; IMP:MGI.::GO:0030318; P:melanocyte differentiation; IMP:MGI.::GO:0043066; P:negative regulation of apoptotic process; IMP:MGI.::GO:0030316; P:osteoclast differentiation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0042127; P:regulation of cell proliferation; IDA:MGI.::GO:0045670; P:regulation of osteoclast differentiation; IMP:MGI.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
3O88368    110   MITF_RAT Microphthalmia-associated transcript...920.076     35     33     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
4O75030    526   MITF_HUMAN Microphthalmia-associated transcri...900.094     36.6     33     46GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0043234; C:protein complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:UniProtKB.
GO:0030318; P:melanocyte differentiation; NAS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006461; P:protein complex assembly; IDA:UniProtKB.
5P20485    582   KICH_YEAST Choline kinase OS=Saccharomyces ce...860.12     36.2     29     43GO:0005737; C:cytoplasm; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004103; F:choline kinase activity; IDA:SGD.::GO:0004305; F:ethanolamine kinase activity; IMP:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006646; P:phosphatidylethanolamine biosynthetic process; IMP:SGD.
6Q9R210    475   TFEB_MOUSE Transcription factor EB OS=Mus mus...900.15     35.8     32     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0001892; P:embryonic placenta development; IMP:UniProtKB.::GO:0006959; P:humoral immune response; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q9PSI9    372   MCL1A_DANRE Protein L-Myc-1a OS=Danio rerio (...1070.17     35.4     28     40GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
8P19484    476   TFEB_HUMAN Transcription factor EB OS=Homo sa...900.18     35.8     32     43GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0001892; P:embryonic placenta development; ISS:UniProtKB.::GO:0006959; P:humoral immune response; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q64092    572   TFE3_MOUSE Transcription factor E3 OS=Mus mus...800.27     35     33     45GO:0005667; C:transcription factor complex; IC:MGI.
GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0006959; P:humoral immune response; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045670; P:regulation of osteoclast differentiation; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10P38165    486   RTG3_YEAST Retrograde regulation protein 3 OS...1110.3     35     26     45GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0001085; F:RNA polymerase II transcription factor binding; IPI:SGD.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; IDA:SGD.
GO:0071400; P:cellular response to oleic acid; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IDA:SGD.::GO:0000422; P:mitochondrion degradation; IMP:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0042991; P:transcription factor import into nucleus; IMP:SGD.
11Q12398    434   HMS1_YEAST Probable transcription factor HMS1...780.32     34.7     31     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007124; P:pseudohyphal growth; IGI:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12A3KNA7    1099   SRBP2_DANRE Sterol regulatory element-binding...630.43     34.7     38     60GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13P20824    823   NUC1_NEUCR Phosphorus acquisition-controlling...1330.48     34.3     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q9UUD1    900   SREBP_SCHPO Sterol regulatory element-binding...820.77     33.9     33     44GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; TAS:PomBase.::GO:0005634; C:nucleus; TAS:PomBase.::GO:0032936; C:SREBP-SCAP complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IMP:PomBase.
GO:0071456; P:cellular response to hypoxia; IMP:PomBase.::GO:0010629; P:negative regulation of gene expression; IEP:PomBase.::GO:0072592; P:oxygen metabolic process; IMP:PomBase.::GO:0070452; P:positive regulation of ergosterol biosynthetic process; IEP:PomBase.::GO:0070455; P:positive regulation of heme biosynthetic process; IEP:PomBase.::GO:0071073; P:positive regulation of phospholipid biosynthetic process; IEP:PomBase.::GO:0035104; P:positive regulation of transcription via sterol regulatory element binding; IMP:PomBase.::GO:0010630; P:regulation of transcription, start site selection; IEP:PomBase.::GO:0008202; P:steroid metabolic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q05B92    573   TFE3_BOVIN Transcription factor E3 OS=Bos tau...800.99     33.5     31     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0006959; P:humoral immune response; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16O43019    793   SRE2_SCHPO Putative transcription factor sre2...1471.1     33.5     29     46GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; NAS:PomBase.
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; TAS:PomBase.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17P19532    575   TFE3_HUMAN Transcription factor E3 OS=Homo sa...801.2     33.1     31     45GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0006959; P:humoral immune response; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q9LSE2    494   ICE1_ARATH Transcription factor ICE1 OS=Arabi...252.4     32.3     48     72GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0050826; P:response to freezing; IMP:TAIR.::GO:0010440; P:stomatal lineage progression; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q9LPW3    450   SCRM2_ARATH Transcription factor SCREAM2 OS=A...252.6     32     48     72GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0010444; P:guard mother cell differentiation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0050826; P:response to freezing; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20P43528    263   E2BA_ECOLX Heat-labile enterotoxin IIB, A cha...1112.6     32     23     41GO:0005576; C:extracellular region; IEA:InterPro.
GO:0003824; F:catalytic activity; IEA:InterPro.
GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
21B0S061    141   RL11_FINM2 50S ribosomal protein L11 OS=Fineg...1276     30.4     28     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
22C4KZQ9    141   RL11_EXISA 50S ribosomal protein L11 OS=Exigu...1277.1     30     28     41GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
23Q9CAD0    596   EGL1_ARATH Transcription factor EGL1 OS=Arabi...308.1     30.8     43     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0009957; P:epidermal cell fate specification; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q07957    307   USF1_XENBO Upstream stimulatory factor 1 OS=X...788.4     30.4     33     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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