Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL054W
Length:
406
Number of sequences:
5887
Description:
YOL054W PSH1 SGDID:S000005415, Chr XV from 228614-229834, Genome Release 64-1-1, Verified ORF, "E3 ubiquitin ligase that mediates poyubiquitination and degradation of centromere-binding protein Cse4p and prevents Cse4p from mislocalizing to euchromatin; ubiquitylation of Cse4p may be antagonized by Scm3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q32L15    230   RN141_BOVIN RING finger protein 141 OS=Bos ta...471.2     34.3     32     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
452P36096    758   TUL1_YEAST Transmembrane E3 ubiquitin-protein...381.3     35     37     50GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IMP:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043162; P:ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IMP:SGD.
453P19474    475   RO52_HUMAN E3 ubiquitin-protein ligase TRIM21...541.3     35     31     44GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IDA:UniProtKB.::GO:0090086; P:negative regulation of protein deubiquitination; IMP:UniProtKB.::GO:0045787; P:positive regulation of cell cycle; IMP:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0031648; P:protein destabilization; IMP:UniProtKB.::GO:0006513; P:protein monoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0070206; P:protein trimerization; IDA:UniProtKB.
454Q60803    567   TRAF3_MOUSE TNF receptor-associated factor 3 ...601.3     35     27     47GO:0035631; C:CD40 receptor complex; IDA:BHF-UCL.::GO:0005768; C:endosome; IEA:UniProtKB-SubCell.::GO:0009898; C:internal side of plasma membrane; IDA:BHF-UCL.
GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IMP:UniProtKB.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.::GO:0050688; P:regulation of defense response to virus; IMP:UniProtKB.::GO:0032648; P:regulation of interferon-beta production; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; IDA:UniProtKB.::GO:0002224; P:toll-like receptor signaling pathway; IMP:UniProtKB.::GO:0033209; P:tumor necrosis factor-mediated signaling pathway; IMP:UniProtKB.
455Q96EX2    444   RNFT2_HUMAN RING finger and transmembrane dom...451.3     35     36     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
456Q3KNV8    242   PCGF3_HUMAN Polycomb group RING finger protei...611.3     34.3     30     43GO:0031519; C:PcG protein complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
457Q5R7K8    230   RN141_PONAB RING finger protein 141 OS=Pongo ...471.3     34.3     32     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
458Q8WVD5    230   RN141_HUMAN RING finger protein 141 OS=Homo s...471.3     34.3     32     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
459P22470    610   SAN1_YEAST Protein SAN1 OS=Saccharomyces cere...411.4     35     34     51GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071630; P:nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.
460Q2XNS1    231   RN141_CANFA RING finger protein 141 OS=Canis ...471.4     34.3     32     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
461Q91Z63    351   TRI63_RAT E3 ubiquitin-protein ligase TRIM63 ...631.4     34.7     29     40GO:0043292; C:contractile fiber; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:RGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006936; P:muscle contraction; IDA:MGI.::GO:0051384; P:response to glucocorticoid stimulus; IEP:RGD.::GO:0070555; P:response to interleukin-1; IEP:RGD.::GO:0014732; P:skeletal muscle atrophy; IEP:RGD.
462Q96DY5    654   RN112_MOUSE RING finger protein 112 OS=Mus mu...471.4     35     34     51GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005525; F:GTP binding; IEA:InterPro.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
463Q9ZV53    423   ATL49_ARATH Putative RING-H2 finger protein A...831.4     34.7     24     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.
464Q8C120    878   SH3R3_MOUSE SH3 domain-containing RING finger...501.4     35     34     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
465Q99MB7    230   RN141_MOUSE RING finger protein 141 OS=Mus mu...471.5     34.3     32     51
GO:0003677; F:DNA binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:MGI.
466Q8VYC8    578   RIN2_ARATH E3 ubiquitin protein ligase RIN2 O...461.5     34.7     30     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009626; P:plant-type hypersensitive response; IEA:UniProtKB-KW.::GO:0034052; P:positive regulation of plant-type hypersensitive response; IGI:TAIR.
467Q38HM4    350   TRI63_MOUSE E3 ubiquitin-protein ligase TRIM6...631.5     34.7     29     40GO:0031430; C:M band; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
468Q2KJ29    242   PCGF3_BOVIN Polycomb group RING finger protei...611.5     34.3     30     43GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
469A6NMD1    445   TR43C_HUMAN Putative tripartite motif-contain...771.6     34.7     29     42GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
470Q8W4Q5    577   RIN3_ARATH E3 ubiquitin protein ligase RIN3 O...461.6     34.7     30     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; TAS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009626; P:plant-type hypersensitive response; IEA:UniProtKB-KW.::GO:0034052; P:positive regulation of plant-type hypersensitive response; IGI:TAIR.
471Q8TEJ3    882   SH3R3_HUMAN SH3 domain-containing RING finger...501.6     34.7     34     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
472Q6IV57    230   RN141_RAT RING finger protein 141 OS=Rattus n...471.6     34.3     32     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
473Q9SN27    225   ATL59_ARATH E3 ubiquitin-protein ligase ATL59...611.6     33.9     31     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
474Q32NQ8    756   RNF10_XENLA RING finger protein 10 OS=Xenopus...461.6     34.7     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010626; P:negative regulation of Schwann cell proliferation; ISS:UniProtKB.::GO:0031643; P:positive regulation of myelination; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
475P31244    790   RAD16_YEAST DNA repair protein RAD16 OS=Sacch...701.7     34.7     29     47GO:0031463; C:Cul3-RING ubiquitin ligase complex; IDA:SGD.::GO:0000113; C:nucleotide-excision repair factor 4 complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000715; P:nucleotide-excision repair, DNA damage recognition; IDA:SGD.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:SGD.
476O00463    557   TRAF5_HUMAN TNF receptor-associated factor 5 ...711.7     34.7     30     44GO:0035631; C:CD40 receptor complex; ISS:BHF-UCL.::GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0009898; C:internal side of plasma membrane; ISS:BHF-UCL.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IEP:UniProtKB.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IMP:BHF-UCL.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
477Q60764    544   MKRN3_MOUSE Probable E3 ubiquitin-protein lig...661.8     34.7     33     45
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
478Q92265    419   PEX10_PICPA Peroxisome biogenesis factor 10 O...281.8     34.3     39     54GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
479O75677    317   RFPL1_HUMAN Ret finger protein-like 1 OS=Homo...1781.9     34.3     26     42
GO:0008270; F:zinc ion binding; IEA:InterPro.
480P24392    305   PEX2_RAT Peroxisome biogenesis factor 2 OS=Ra...581.9     34.3     22     53GO:0005624; C:membrane fraction; IDA:RGD.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007031; P:peroxisome organization; IEA:UniProtKB-KW.
481Q6J1I8    228   RN114_PIG RING finger protein 114 OS=Sus scro...492     33.9     31     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
records
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