Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL034W
Length:
1093
Number of sequences:
5887
Description:
YOL034W SMC5 SGDID:S000005394, Chr XV from 259923-263204, Genome Release 64-1-1, Verified ORF, "Structural maintenance of chromosomes (SMC) protein; essential subunit of the Mms21-Smc5-Smc6 complex; required for growth and DNA repair; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q7NG51    1165   SMC_GLOVI Chromosome partition protein Smc OS...710.096     40.4     30     46GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
92Q5H054    1167   SMC_XANOR Chromosome partition protein Smc OS...1140.15     40     26     44GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
93Q97WH0    864   RAD50_SULSO DNA double-strand break repair Ra...2250.088     40.8     22     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
94P62134    993   RAD50_METMP DNA double-strand break repair Ra...660.09     40.8     35     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
95A4T4U1    389   RECF_MYCGI DNA replication and repair protein...1060.09     40     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
96O93309    1209   SMC3_XENLA Structural maintenance of chromoso...2322.7     35.8     22     45GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0030893; C:meiotic cohesin complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006275; P:regulation of DNA replication; ISS:UniProtKB.
97Q6G098    264   HMUV_BARQU Hemin import ATP-binding protein H...500.097     39.7     48     60GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0005215; F:transporter activity; IEA:InterPro.
98O97594    1218   SMC3_BOVIN Structural maintenance of chromoso...2320.92     37.4     22     45GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0030893; C:meiotic cohesin complex; ISS:UniProtKB.::GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0045502; F:dynein binding; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007052; P:mitotic spindle organization; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; ISS:UniProtKB.::GO:0007165; P:signal transduction; ISS:UniProtKB.
99Q5R4K5    1217   SMC3_PONAB Structural maintenance of chromoso...2321.1     37     22     45GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0030893; C:meiotic cohesin complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
100Q9CW03    1217   SMC3_MOUSE Structural maintenance of chromoso...2321.1     37     22     45GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0000800; C:lateral element; IDA:MGI.::GO:0030893; C:meiotic cohesin complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0045502; F:dynein binding; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007052; P:mitotic spindle organization; ISS:UniProtKB.::GO:0007165; P:signal transduction; ISS:UniProtKB.
101Q9UQE7    1217   SMC3_HUMAN Structural maintenance of chromoso...2321.1     37     22     45GO:0005604; C:basement membrane; TAS:ProtInc.::GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030893; C:meiotic cohesin complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000922; C:spindle pole; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0045502; F:dynein binding; IDA:UniProtKB.::GO:0003777; F:microtubule motor activity; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; TAS:ProtInc.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IDA:UniProtKB.::GO:0007091; P:mitotic metaphase/anaphase transition; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0007052; P:mitotic spindle organization; IEP:UniProtKB.::GO:0032876; P:negative regulation of DNA endoreduplication; IMP:BHF-UCL.::GO:0007165; P:signal transduction; IDA:UniProtKB.::GO:0007062; P:sister chromatid cohesion; NAS:UniProtKB.
102P97690    1191   SMC3_RAT Structural maintenance of chromosome...2321.3     37     22     45GO:0005604; C:basement membrane; IDA:RGD.::GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0030893; C:meiotic cohesin complex; ISS:UniProtKB.::GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0045502; F:dynein binding; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007052; P:mitotic spindle organization; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; ISS:UniProtKB.::GO:0007165; P:signal transduction; ISS:UniProtKB.
103B1VPF3    376   RECF_STRGG DNA replication and repair protein...420.11     40     38     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
104P73340    1200   SMC_SYNY3 Chromosome partition protein Smc OS...560.28     38.9     30     59GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0009295; C:nucleoid; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
105C5BUP6    397   RECF_BEUC1 DNA replication and repair protein...1000.12     39.7     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
106Q6MAG9    359   RECF_PARUW DNA replication and repair protein...880.13     39.7     32     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
107A0PKB4    385   RECF_MYCUA DNA replication and repair protein...1020.13     39.7     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
108B2HI48    385   RECF_MYCMM DNA replication and repair protein...1020.14     39.7     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
109Q9Z1M9    1233   SMC1A_RAT Structural maintenance of chromosom...743.6     35.4     34     50GO:0000776; C:kinetochore; ISS:UniProtKB.::GO:0030893; C:meiotic cohesin complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IDA:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0009314; P:response to radiation; ISS:UniProtKB.::GO:0042770; P:signal transduction in response to DNA damage; ISS:UniProtKB.
110Q14683    1233   SMC1A_HUMAN Structural maintenance of chromos...743.6     35.4     34     50GO:0008280; C:cohesin core heterodimer; TAS:UniProtKB.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0000794; C:condensed nuclear chromosome; TAS:ProtInc.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0030893; C:meiotic cohesin complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003777; F:microtubule motor activity; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0000075; P:cell cycle checkpoint; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; TAS:UniProtKB.::GO:0007126; P:meiosis; ISS:UniProtKB.::GO:0007091; P:mitotic metaphase/anaphase transition; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0007064; P:mitotic sister chromatid cohesion; TAS:UniProtKB.::GO:0007052; P:mitotic spindle organization; TAS:UniProtKB.::GO:0032876; P:negative regulation of DNA endoreduplication; IMP:BHF-UCL.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0009314; P:response to radiation; IEP:UniProtKB.::GO:0042770; P:signal transduction in response to DNA damage; IDA:UniProtKB.
111Q9CU62    1233   SMC1A_MOUSE Structural maintenance of chromos...743.6     35.4     34     50GO:0000776; C:kinetochore; ISS:UniProtKB.::GO:0030893; C:meiotic cohesin complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0009314; P:response to radiation; ISS:UniProtKB.::GO:0042770; P:signal transduction in response to DNA damage; ISS:UniProtKB.
112O97593    1233   SMC1A_BOVIN Structural maintenance of chromos...743.6     35.4     34     50GO:0000776; C:kinetochore; ISS:UniProtKB.::GO:0030893; C:meiotic cohesin complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; ISS:UniProtKB.
GO:0000075; P:cell cycle checkpoint; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0009314; P:response to radiation; ISS:UniProtKB.::GO:0042770; P:signal transduction in response to DNA damage; ISS:UniProtKB.
113P16053    858   NFM_CHICK Neurofilament medium polypeptide OS...2520.17     39.7     22     48GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
GO:0005198; F:structural molecule activity; IEA:InterPro.
114B0CB57    374   RECF_ACAM1 DNA replication and repair protein...820.18     39.3     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
115Q6G475    266   HMUV_BARHE Hemin import ATP-binding protein H...490.18     38.9     45     61GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0005215; F:transporter activity; IEA:InterPro.
116Q9FJL0    1241   SMC4_ARATH Structural maintenance of chromoso...420.34     38.9     38     62GO:0005694; C:chromosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
117Q5E8Z0    359   RECF_VIBF1 DNA replication and repair protein...550.27     38.5     36     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
118Q8DDJ1    359   RECF_VIBVU DNA replication and repair protein...410.29     38.5     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
119Q7MQJ5    359   RECF_VIBVY DNA replication and repair protein...410.29     38.5     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
120A1SCL9    420   RECF_NOCSJ DNA replication and repair protein...410.33     38.5     39     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
121Q31UV3    357   RECF_SHIBS DNA replication and repair protein...720.34     38.1     31     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
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