UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YOL034W

Length:

1093

Number of sequences:

5887

Description:

YOL034W SMC5 SGDID:S000005394, Chr XV from 259923-263204, Genome Release 64-1-1, Verified ORF, "Structural maintenance of chromosomes (SMC) protein; essential subunit of the Mms21-Smc5-Smc6 complex; required for growth and DNA repair; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
31	Q88WJ9	1185	SMC_LACPL Chromosome partition protein Smc OS...	180	0.039	42	23	42	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
32	B8GZ28	1147	SMC_CAUCN Chromosome partition protein Smc OS...	131	0.00002	52.8	27	47	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
33	Q00737	1215	SUDA_EMENI Chromosome segregation protein sud...	74	1.8	36.6	28	53	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
34	Q10970	1205	SMC_MYCTU Chromosome partition protein Smc OS...	137	0.004	45.1	27	45	GO:0005618; C:cell wall; IDA:MTBBASE.::GO:0005694; C:chromosome; IEA:InterPro.::GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0005886; C:plasma membrane; IDA:MTBBASE.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
35	Q9CBT5	1203	SMC_MYCLE Chromosome partition protein Smc OS...	136	0.29	38.9	25	43	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
36	Q8I1U7	1193	SMC3_PLAF7 Structural maintenance of chromoso...	208	0.00005	51.2	24	49	GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0034990; C:nuclear mitotic cohesin complex; ISS:UniProtKB.
									GO:0003680; F:AT DNA binding; ISS:UniProtKB.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; ISS:UniProtKB.::GO:0006275; P:regulation of DNA replication; ISS:UniProtKB.
37	Q5JHN1	883	RAD50_PYRKO DNA double-strand break repair Ra...	45	0.00006	51.2	47	73
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
38	P75361	982	SMC_MYCPN Chromosome partition protein Smc OS...	230	0.065	41.2	20	44	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
39	P50533	1203	SMC2_XENLA Structural maintenance of chromoso...	92	6.5	34.7	24	51	GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
40	O33600	886	RAD50_SULAC DNA double-strand break repair Ra...	74	0.0001	49.7	35	59
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
41	P47540	982	SMC_MYCGE Chromosome partition protein Smc OS...	154	7.6	34.3	21	46	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
42	Q7ZAK1	1168	SMC_THEEB Chromosome partition protein Smc OS...	142	0.015	43.1	28	46	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
43	P41508	979	SMC_MYCHR Chromosome partition protein Smc OS...	190	8.4	34.3	23	45	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
44	P51834	1186	SMC_BACSU Chromosome partition protein Smc OS...	98	0.002	45.8	30	51	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
45	Q24U48	1198	SMC_DESHY Chromosome partition protein Smc OS...	85	0.025	42.4	34	52	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
46	C4ZJU1	1208	SMC_THASP Chromosome partition protein Smc OS...	129	0.71	37.7	26	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
47	P38989	1170	SMC2_YEAST Structural maintenance of chromoso...	44	3.7	35.4	34	64	GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000799; C:nuclear condensin complex; IPI:SGD.
									GO:0003680; F:AT DNA binding; IDA:SGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0000217; F:DNA secondary structure binding; IDA:SGD.::GO:0003690; F:double-stranded DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007076; P:mitotic chromosome condensation; IMP:SGD.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.::GO:0070058; P:tRNA gene clustering; IMP:SGD.
48	P41003	1172	SMC2_SCHPO Structural maintenance of chromoso...	130	1.2	37	23	52	GO:0000939; C:condensed chromosome inner kinetochore; IDA:PomBase.::GO:0000796; C:condensin complex; IDA:PomBase.::GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007076; P:mitotic chromosome condensation; IMP:PomBase.::GO:0034500; P:rDNA separation; IMP:PomBase.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
49	Q96YR5	879	RAD50_SULTO DNA double-strand break repair Ra...	90	0.001	46.6	30	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
50	Q9UZC8	880	RAD50_PYRAB DNA double-strand break repair Ra...	92	0.001	46.6	30	55
									GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0016887; F:ATPase activity; IEA:HAMAP.::GO:0004519; F:endonuclease activity; IEA:HAMAP.::GO:0004527; F:exonuclease activity; IEA:HAMAP.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:HAMAP.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; IEA:HAMAP.
51	Q8IED2	1218	SMC2_PLAF7 Structural maintenance of chromoso...	144	0.001	46.6	26	46	GO:0000796; C:condensin complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046982; F:protein heterodimerization activity; ISS:UniProtKB.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007076; P:mitotic chromosome condensation; ISS:UniProtKB.
52	A9BZW2	1175	SMC_DELAS Chromosome partition protein Smc OS...	201	0.003	45.4	25	46	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
53	Q54PK4	1184	SMC2_DICDI Structural maintenance of chromoso...	90	4.9	35	27	53	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005634; C:nucleus; ISS:dictyBase.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007076; P:mitotic chromosome condensation; ISS:dictyBase.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
54	Q6N1B7	1154	SMC_RHOPA Chromosome partition protein Smc OS...	133	0.003	45.4	27	47	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
55	Q7UQV4	1192	SMC_RHOBA Chromosome partition protein Smc OS...	97	4	35.4	28	49	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
56	P47037	1230	SMC3_YEAST Structural maintenance of chromoso...	222	0.004	45.1	23	46	GO:0034990; C:nuclear mitotic cohesin complex; IDA:SGD.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.
									GO:0030437; P:ascospore formation; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051177; P:meiotic sister chromatid cohesion; IMP:SGD.::GO:0007064; P:mitotic sister chromatid cohesion; IGI:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0007130; P:synaptonemal complex assembly; IMP:SGD.
57	Q604U6	1169	SMC_METCA Chromosome partition protein Smc OS...	98	0.024	42.4	29	48	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
58	Q20060	1549	SMC4_CAEEL Structural maintenance of chromoso...	161	0.013	43.5	26	49	GO:0000775; C:chromosome, centromeric region; IDA:WormBase.::GO:0000793; C:condensed chromosome; IDA:WormBase.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
									GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007276; P:gamete generation; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040039; P:inductive cell migration; IMP:WormBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
59	Q8TXI4	876	RAD50_METKA DNA double-strand break repair Ra...	45	0.005	44.7	31	69
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
60	B8CW13	1185	SMC_HALOH Chromosome partition protein Smc OS...	122	0.073	40.8	28	47	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
61	O66878	1156	SMC_AQUAE Chromosome partition protein Smc OS...	387	0.008	44.3	21	46	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.

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